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Frequent and focal FGFR1 amplification associates with therapeutically tractable FGFR1 dependency in squamous cell lung cancer
Authors:Weiss Jonathan  Sos Martin L  Seidel Danila  Peifer Martin  Zander Thomas  Heuckmann Johannes M  Ullrich Roland T  Menon Roopika  Maier Sebastian  Soltermann Alex  Moch Holger  Wagener Patrick  Fischer Florian  Heynck Stefanie  Koker Mirjam  Schöttle Jakob  Leenders Frauke  Gabler Franziska  Dabow Ines  Querings Silvia  Heukamp Lukas C  Balke-Want Hyatt  Ansén Sascha  Rauh Daniel  Baessmann Ingelore  Altmüller Janine  Wainer Zoe  Conron Matthew  Wright Gavin  Russell Prudence  Solomon Ben  Brambilla Elisabeth  Brambilla Christian  Lorimier Philippe  Sollberg Steinar  Brustugun Odd Terje  Engel-Riedel Walburga  Ludwig Corinna
Affiliation:Max Planck Institute for Neurological Research, Klaus-Joachim-Zülch Laboratories of the Max Planck Society and the Medical Faculty of the University of Cologne, 50931 Cologne, Germany.
Abstract:
Lung cancer remains one of the leading causes of cancer-related death in developed countries. Although lung adenocarcinomas with EGFR mutations or EML4-ALK fusions respond to treatment by epidermal growth factor receptor (EGFR) and anaplastic lymphoma kinase (ALK) inhibition, respectively, squamous cell lung cancer currently lacks therapeutically exploitable genetic alterations. We conducted a systematic search in a set of 232 lung cancer specimens for genetic alterations that were therapeutically amenable and then performed high-resolution gene copy number analyses. We identified frequent and focal fibroblast growth factor receptor 1 (FGFR1) amplification in squamous cell lung cancer (n = 155), but not in other lung cancer subtypes, and, by fluorescence in situ hybridization, confirmed the presence of FGFR1 amplifications in an independent cohort of squamous cell lung cancer samples (22% of cases). Using cell-based screening with the FGFR inhibitor PD173074 in a large (n = 83) panel of lung cancer cell lines, we demonstrated that this compound inhibited growth and induced apoptosis specifically in those lung cancer cells carrying amplified FGFR1. We validated the FGFR1 dependence of FGFR1-amplified cell lines by FGFR1 knockdown and by ectopic expression of an FGFR1-resistant allele (FGFR1(V561M)), which rescued FGFR1-amplified cells from PD173074-mediated cytotoxicity. Finally, we showed that inhibition of FGFR1 with a small molecule led to significant tumor shrinkage in vivo. Thus, focal FGFR1 amplification is common in squamous cell lung cancer and associated with tumor growth and survival, suggesting that FGFR inhibitors may be a viable therapeutic option in this cohort of patients.
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