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石蜡包埋组织DNA提取方法的比较及巢式PCR技术的应用
引用本文:Yan L,Sun B,Zhao X,Liu Z,Song W. 石蜡包埋组织DNA提取方法的比较及巢式PCR技术的应用[J]. 生物医学工程学杂志, 2011, 28(4): 795-799
作者姓名:Yan L  Sun B  Zhao X  Liu Z  Song W
作者单位:天津医科大学病理教研室;
基金项目:天津市科技发展基金资助项目(020127)
摘    要:确定从福尔马林固定、石蜡包埋(FFPE)组织中提取DNA的最佳方法,增强长片段PCR产物的成功扩增率,便于分子生物学与临床医学的有机结合。本文选取正常甲状腺FFPE标本20份,分别应用一步法、酚/氯仿抽提法和试剂盒法三种不同的方法提取总DNA,并应用传统PCR法和巢式PCR法对线粒体DNA(mtDNA)的D环区进行扩增。结果酚/氯仿抽提法所得样本DNA的OD260/D280比值最高,为1.703±0.086。一步法、酚/氯仿抽提法和试剂盒法提取DNA的普通PCR长片段扩增成功率分别为0%、5%和10%,而巢式PCR长片段扩增成功率分别为0%、95%和85%。可见用蛋白酶K消化、酚/氯仿纯化法提取的FFPE组织标本DNA质量可靠,巢式PCR技术是从石蜡标本中扩增长片段DNA的有效方法。

关 键 词:石蜡包埋组织  DNA提取  巢式PCR  比较  

Analysis of different methods of extracting DNA from paraffin-embedded tissues and the application of nest PCR
Yan Limin,Sun Baocun,Zhao Xiulan,Liu Zenghui,Song Wenjing. Analysis of different methods of extracting DNA from paraffin-embedded tissues and the application of nest PCR[J]. Journal of biomedical engineering, 2011, 28(4): 795-799
Authors:Yan Limin  Sun Baocun  Zhao Xiulan  Liu Zenghui  Song Wenjing
Affiliation:Yan Limin Sun Baocun Zhao Xiulan Liu Zenghui Song Wenjing(Department of Pathology,Tianjin Medical University,Tianjin 300070,China)
Abstract:The aim of this research was to explore the most optimal method of DNA extraction from formalin-fixed,paraffin-embedded(FFPE) tissues,and to improve the amplification of long fragments with the method.Three methods,one step method,phenol-chloroform extraction method,and genomic DNA purification kit method,were employed to extract DNA from twenty normal thyroid tissues which were fixed with formalin and embedded with paraffin.The highest proportionality of OD260/OD280 in the examples was obtained by phenol-c...
Keywords:Paraffin-embedded tissues  DNA extraction  Nest PCR  Comparison  
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