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SMARCA4 mutations in KRAS‐mutant lung adenocarcinoma: a multi‐cohort analysis
Authors:Liang Liu  Tamjeed Ahmed  William J Petty  Stefan Grant  Jimmy Ruiz  Thomas W Lycan  Umit Topaloglu  Ping&#x;Chieh Chou  Lance D Miller  Gregory A Hawkins  Martha A Alexander&#x;Miller  Stacey S O&#x;Neill  Bayard L Powell  Ralph B D&#x;Agostino  Jr  Reginald F Munden  Boris Pasche  Wei Zhang
Abstract:KRAS is a key oncogenic driver in lung adenocarcinoma (LUAD). Chromatin‐remodeling gene SMARCA4 is comutated with KRAS in LUAD; however, the impact of SMARCA4 mutations on clinical outcome has not been adequately established. This study sought to shed light on the clinical significance of SMARCA4 mutations in LUAD. The association of SMARCA4 mutations with survival outcomes was interrogated in four independent cohorts totaling 564 patients: KRAS‐mutant patients with LUAD who received nonimmunotherapy treatment from (a) The Cancer Genome Atlas (TCGA) and (b) the MSK‐IMPACT Clinical Sequencing (MSK‐CT) cohorts; and KRAS‐mutant patients with LUAD who received immune checkpoint inhibitor‐based immunotherapy treatment from (c) the MSK‐IMPACT (MSK‐IO) and (d) the Wake Forest Baptist Comprehensive Cancer Center (WFBCCC) immunotherapy cohorts. Of the patients receiving nonimmunotherapy treatment, in the TCGA cohort (n = 155), KRAS‐mutant patients harboring SMARCA4 mutations (KS) showed poorer clinical outcome P = 6e‐04 for disease‐free survival (DFS) and 0.031 for overall survival (OS), respectively], compared to KRASTP53 comutant (KP) and KRAS‐only mutant (K) patients; in the MSK‐CT cohort (n = 314), KS patients also exhibited shorter OS than KP (= 0.03) or K (= 0.022) patients. Of patients receiving immunotherapy, KS patients consistently exhibited the shortest progression‐free survival (PFS; = 0.0091) in the MSK‐IO (n = 77), and the shortest PFS (= 0.0026) and OS (P = 0.0014) in the WFBCCC (n = 18) cohorts, respectively. Therefore, mutations of SMARCA4 represent a genetic factor leading to adverse clinical outcome in lung adenocarcinoma treated by either nonimmunotherapy or immunotherapy.

Abbreviations

DCB
durable clinical benefit
DFS
disease‐free survival
K
KRAS‐only mutant
KL
KRAS‐STK11 comutant
KP
KRAS‐TP53 comutant
KS
KRAS‐SMARCA4 comutant
LUAD
lung adenocarcinoma
LUSC
lung squamous carcinoma
MSK‐CT
the MSK‐IMPACT clinical sequencing cohort
MSK‐IO
MSK‐IMPACT cohort
NSCLC
non‐small‐cell lung cancer
OS
overall survival
PFS
progression‐free survival
TCGA
The Cancer Genome Atlas
WFBCCC
the Wake Forest Baptist Comprehensive Cancer Center
Keywords:immunotherapy  KRAS  lung adenocarcinoma  nonimmunotherapy  prognostics biomarker  SMARCA4 mutation
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