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基于网络药理学及分子对接技术探讨血必净注射液治疗新型冠状病毒肺炎的潜在靶标及机制
引用本文:周辉芳,王君平,苏利波,王燕,孙涛涛,杨新英,张聪悦,谢英,孙殿兴. 基于网络药理学及分子对接技术探讨血必净注射液治疗新型冠状病毒肺炎的潜在靶标及机制[J]. 中国热带医学, 2022, 22(8): 769-775. DOI: 10.13604/j.cnki.46-1064/r.2022.08.16
作者姓名:周辉芳  王君平  苏利波  王燕  孙涛涛  杨新英  张聪悦  谢英  孙殿兴
作者单位:1.解放军联勤保障部队第九八〇医院感染科,河北 石家庄 050082; 2.河北医科大学实验动物学部,河北省实验动物重点实验室,河北 石家庄 050017; 3.解放军联勤保障部队第九八〇医院全军肝病中心,河北 石家庄 050082
基金项目:河北省自然科学基金项目(No. C2020206052); 石家庄市科学技术研究与发展计划项目(No. 201200533)
摘    要:Objective To explore the potential regulatory mechanism of Xuebijing injection in the treatment of COVID-19 by using network pharmacology and molecular docking methods. Methods Corresponding target genes of all the active ingredients of Xuebijing injection were obtained by using the pharmacological database and analysis platform of TCM System (TCMSP). And intersections with the COVID-19 gene-related targets in GeneCards database, OMIM database, PharmGkb database, TTD database and DrugBank database using the R programming language. Thus, the core target of Xubijing injection in COVID-19 treatment was obtained; Cytoscape 3.7.2 software was used to construct TCM - compound - target network; PPI network of intersection target was obtained by STRING; Utilized data packets to perform gene ontology (GO) functional enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis to predict the mechanism of overlapping targets. Finally, molecular docking technology was implemented to dock key active ingredients with PPI core protein. Results GO functional enrichment analysis included 1 818 biological processes (BP), 20 cellular components (CC) and 89 molecular functions (MF). The first 30 KEGG related pathways involved inflammation and immune response, such as rheumatoid arthritis signaling pathway, IL-17 signaling pathway, Th17 cell differentiation pathway, hypoxia-inducible factor (HIF-1) signaling pathway, JAK-Stat signaling pathway, inflammatory bowel disease signaling pathway, NF-κB signaling pathway, etc. Quercetin, cryptotanshinone, luteolin, β -carotene can affect IL1B, STAT3, AKT1, VEGFA and other overlapping targets. Meanwhile, quercetin may exert anti-inflammatory, antiviral and immune responses through IL1B binding to treat COVID-19. Conclusion This study reveals that chemical components in Xuebijing injection are involved in multiple biological processes and pathways in COVID-19 treatment through binding to key target proteins. © 2022. China Tropical Medicine. All rights reserved.

关 键 词:网络药理学  分子对接  血必净注射液  新型冠状病毒肺炎
收稿时间:2022-05-28

Exploring the potential targets and mechanisms of Xuebijing Injection for COVID-19 based on network pharmacology and molecular docking technology
ZHOU Hui-fang,WANG Jun-ping,SU Li-bo,WANG Yan,SUN Tao-tao,YANG Xin-ying,ZHANG Cong-yue,XIE Ying,SUN Dian-xing. Exploring the potential targets and mechanisms of Xuebijing Injection for COVID-19 based on network pharmacology and molecular docking technology[J]. China Tropical Medicine, 2022, 22(8): 769-775. DOI: 10.13604/j.cnki.46-1064/r.2022.08.16
Authors:ZHOU Hui-fang  WANG Jun-ping  SU Li-bo  WANG Yan  SUN Tao-tao  YANG Xin-ying  ZHANG Cong-yue  XIE Ying  SUN Dian-xing
Affiliation:1. Department of Infectious Diseases, the 980th Hospital of PLA Joint Logistics Support Force, Shijiazhuang, Hebei 050082, China; 2. Hebei Key Laboratory of Laboratory Animal Science, Hebei Medical University, Shijiazhuang, Hebei 050017, China; 3. The Liver Disease Center of PLA, the 980th Hospital of PLA Joint Logistics Support Force, Shijiazhuang, Hebei 050082, China
Abstract:Objective To explore the potential regulatory mechanism of Xuebijing injection in the treatment of COVID-19 by using network pharmacology and molecular docking methods. Methods Corresponding target genes of all the active ingredients of Xuebijing injection were obtained by using the pharmacological database and analysis platform of TCM System (TCMSP). And intersections with the COVID-19 gene-related targets in GeneCards database, OMIM database, PharmGkb database, TTD database and DrugBank database using the R programming language. Thus, the core target of Xubijing injection in COVID-19 treatment was obtained; Cytoscape 3.7.2 software was used to construct TCM - compound - target network; PPI network of intersection target was obtained by STRING; Utilized data packets to perform gene ontology (GO) functional enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis to predict the mechanism of overlapping targets. Finally, molecular docking technology was implemented to dock key active ingredients with PPI core protein. Results GO functional enrichment analysis included 1 818 biological processes (BP), 20 cellular components (CC) and 89 molecular functions (MF). The first 30 KEGG related pathways involved inflammation and immune response, such as rheumatoid arthritis signaling pathway, IL-17 signaling pathway, Th17 cell differentiation pathway, hypoxia-inducible factor (HIF-1) signaling pathway, JAK-Stat signaling pathway, inflammatory bowel disease signaling pathway, NF-κB signaling pathway, etc. Quercetin, cryptotanshinone, luteolin, β -carotene can affect IL1B, STAT3, AKT1, VEGFA and other overlapping targets. Meanwhile, quercetin may exert anti-inflammatory, antiviral and immune responses through IL1B binding to treat COVID-19. Conclusion This study reveals that chemical components in Xuebijing injection are involved in multiple biological processes and pathways in COVID-19 treatment through binding to key target proteins.
Keywords:Network pharmacology  molecular docking  Xuebijing injection  COVID-19  
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