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肝癌高发区广西隆安县乙型肝炎病毒株全基因序列分析
引用本文:葛宪民,方钟燎,李丹亚,赵连三. 肝癌高发区广西隆安县乙型肝炎病毒株全基因序列分析[J]. 中华实验和临床病毒学杂志, 2004, 18(3): 272-276
作者姓名:葛宪民  方钟燎  李丹亚  赵连三
作者单位:1. 530021,南宁,广西壮族自治区职业病防治研究所
2. 广西壮族自治区疾病预防控制中心
3. 广西医科大学第一附属医院
4. 四川大学华西医学中心第一附属医院
摘    要:
目的 探讨肝癌高发区广西隆安县乙型肝炎病毒(HBV)株的全基因序列是否存在地域特殊性。方法 用套式PCR(nPCR)扩增该县HBV无症状携带者血清HBV全基因,用克隆测序法测序并做同源性对比。结果 本病毒株共3215个碱基,基因型为C,血清型为adw。其P基因区有40处发生碱基点突变,导致11个氨基酸改变;S基因区的前S1、前S2和S基因分别有11、2和3个碱基点突变,分别导致3、1、1氨基酸改变,未发现“a”区突变;X基因区共有6个碱基点突变,导致4个氨基酸改变,其中出现能影响e抗原表达的双突变(nt1762A→T、1764G→A);未发现前C区基因突变,C基因有13个碱基发生突变,导致2个氨基酸改变。本病毒株与越南北部病毒株高于同为C基因型的上海株、北京株、西藏株。结论 未发现肝癌高发区的本例HBV基因C型的隆安株,基因虽有肝癌高发性,但无地域特殊性。

关 键 词:肝癌 高发区 改变 乙型肝炎病毒 点突变 HBV C基因 病毒株 氨基酸 上海株
修稿时间:2003-11-27

Full-length sequence of hepatitis B virus isolated from high incidence hepatocellular carcinoma area-Longan county
GE Xian-min ,FANG Zhong-liao,LI Dan-ya,ZHAO Lian-san Guangxi Institute of Occupational Health,Nanning ,China. Full-length sequence of hepatitis B virus isolated from high incidence hepatocellular carcinoma area-Longan county[J]. Chinese journal of experimental and clinical virology, 2004, 18(3): 272-276
Authors:GE Xian-min   FANG Zhong-liao  LI Dan-ya  ZHAO Lian-san Guangxi Institute of Occupational Health  Nanning   China
Affiliation:Guangxi Institute of Occupational Health, Nanning 530021, China.
Abstract:
OBJECTIVE: To understand full-length sequence of HBV isolated from high incidence hepatocellular carcinoma area-Longan county, Guangxi. METHODS: The nested polymerase chain reaction (nPCR) was used for amplifying the whole HBV DNA in sera of asymptomatic carriers. The products were sequenced by clone sequencing and homological analysis. RESULTS: This isolate contained 3 215 bases. The genotype was C and the serotype was adw. There were 40 point mutations in polymerase gene which made 11 amino acids change. There were 11,2 and 3 point mutations in PreS1, PreS2 and S gene respectively which made 3,1,1, amino acids change. Six point mutations including the double mutations (nt 1762 A to T, 1764 G to A) were found in X gene leading to 4 amino acids change. There were 13 point mutations in C gene which made 2 amino acids change. No mutation was found in a determinant and Pre C. The isolate was quite close to the isolate from Vietnamese in evolution while far from the genotype C isolates from Shanghai, Beijing and Tibet. CONCLUSION: No special sequence was found in the isolate from high incidence hepatocellular carcinoma area, Longan county, Guangxi.
Keywords:Hepatitis B virus  Genes  Sequence analysis
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