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DNA methylation profiling of ovarian carcinomas and their in vitro models identifies HOXA9, HOXB5, SCGB3A1, and CRABP1 as novel targets
Authors:Qinghua Wu   Ragnhild A Lothe   Terje Ahlquist   Ilvars Silins   Claes G Tropé   Francesca Micci   Jahn M Nesland   Zhenhe Suo  Guro E Lind
Affiliation:(1) Department of Pathology, Rikshospitalet-Radiumhospitalet Medical Center, Oslo, Norway;(2) Department of Cancer Prevention, Institute for Cancer Research, Rikshospitalet-Radiumhospitalet Medical Center, Oslo, Norway;(3) Centre for Cancer Biomedicine, University of Oslo, Oslo, Norway;(4) Department of Gynecologic Oncology, Rikshospitalet-Radiumhospitalet Medical Center, Oslo, Norway;(5) Department of Medical Genetics, Rikshospitalet-Radiumhospitalet Medical Center, Oslo, Norway
Abstract:

Background  

The epigenetics of ovarian carcinogenesis remains poorly described. We have in the present study investigated the promoter methylation status of 13 genes in primary ovarian carcinomas (n = 52) and their in vitro models (n = 4; ES-2, OV-90, OVCAR-3, and SKOV-3) by methylation-specific polymerase chain reaction (MSP). Direct bisulphite sequencing analysis was used to confirm the methylation status of individual genes. The MSP results were compared with clinico- pathological features.
Keywords:
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