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A study of the genetic variability of human respiratory syncytial virus in Croatia, 2006–2008
Authors:Dubravko Forcic  Jelena Ivancic‐Jelecki  Gordana Mlinaric‐Galinovic  Gordana Vojnovic  Andrea Babic‐Erceg  Irena Tabain
Affiliation:1. Molecular Biomedicine Unit, Institute of Immunology, Zagreb, Croatia;2. University Medical School of Zagreb, Zagreb, Croatia;3. Department of Virology, Croatian National Institute of Public Health, Zagreb, Croatia
Abstract:Human respiratory syncytial virus (HRSV) is a common etiological agent of acute lower respiratory tract disease in infants. The molecular epidemiology of HRSV in Croatia over four consecutive seasons (from 2006 to 2008) was investigated. A total of 72 HRSV samples were chosen from 696 screened cases in a pediatric clinic in Zagreb. Molecular characterization of HRSV revealed the predominance of HRSV group B viruses in the first two epidemic seasons and HRSV group A viruses in the next two seasons. According to the phylogenetic analysis, NA1 and BA9 were the predominant circulating HRSV genotypes detected during the study. Overall, 82.9% of all HRSV A strains belonged to the NA1 genotype. The HRSV B genotype BA9, detected in two consecutive seasons (2006 and 2007), was the predominant circulating HRSV B genotype, accounting for 80.6% of all HRSV B strains. This study provides data on the circulation pattern of HRSV genotypes in Croatia and their molecular characterization. J. Med. Virol. 84:1985–1992, 2012. © 2012 Wiley Periodicals, Inc.
Keywords:human respiratory syncytial virus  phylogenetic analysis  genetic variability  molecular epidemiology
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