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3-O-C12-HSL通过抑制lncRNA CD48-AS和CD48的表达而阻碍Mo-DCs成熟
引用本文:罗燕芬,庄奇真,张轩,陈茶,刘杨,颜星星,肖倩,李有强.3-O-C12-HSL通过抑制lncRNA CD48-AS和CD48的表达而阻碍Mo-DCs成熟[J].天津医药,2021,49(12):1233-1239.
作者姓名:罗燕芬  庄奇真  张轩  陈茶  刘杨  颜星星  肖倩  李有强
作者单位:1广东省中医院检验医学部(邮编501180);2广州中医药大学第二临床医学院;3南方医科大学附属何贤纪念医院检验科
基金项目:国家自然科学基金资助项目(81601736);广东省中医药局中医药科研项目(20192027)
摘    要:目的 筛选并阐明长链非编码RNA(lncRNA)CD48-AS与其反义互补分子CD48 mRNA在N-3-氧代十二 烷酰-L-同型丝氨酸内酯(3-O-C12-HSL)阻碍人单核细胞诱导的树突状细胞(Mo-DCs)成熟过程中发挥作用的机制。 方法 从健康人外周血中分离Mo-DCs,将未成熟的Mo-DCs细胞分为阴性对照组(0.1% DMSO)、脂多糖(LPS)阳性 对照组(100 μg/L的LPS)和实验组(100 μg/L LPS+40 μmol/L 3-O-C12-HSL)进行lncRNA芯片检测。筛选lncRNA表 达谱中差异表达 5 倍以上的自然反义 lncRNA 进行聚类分析,从中筛选差异具有统计学意义的自然反义 lncRNA CD48-AS。未成熟的 Mo-DCs 分为阴性对照组、LPS 阳性对照组以及 LPS+C5、C10、C25 实验组(分别加入 5、10、 25 μmol/L的3-O-C12-HSL)。利用荧光定量PCR检测lncRNA CD48-AS和反义分子CD48 mRNA在实验体系中的表 达水平;通过生物信息学分析lncRNA CD48-AS与CD48反义互补区及其蛋白编码功能;通过核糖核酸酶保护实验 (RPA)验证lncRNA CD48-AS是否与CD48形成二聚体,从而通过影响靶CD48的表达来发挥调控作用。最后检测 lncRNA CD48-AS在细胞内的定位。结果 3-O-C12-HSL处理Mo-DCs后lncRNA表达谱出现了特异性改变。3-OC 12-HSL可下调由LPS诱导的Mo-DCs中lncRNA CD48-AS及其反义靶分子CD48的表达。生物信息学分析lncRNA CD48-AS 不具备蛋白编码功能,为非编码 RNA;lncRNA CD48-AS 与 CD48 形成 RNA 二聚体从而减少 RNA 酶对 CD48 mRNA的降解,使得CD48 mRNA表达增加;lncRNA CD48-AS在Mo-DCs中主要定位在细胞核中,细胞质中表 达量较少。结论 3-O-C12-HSL可通过下调lncRNA CD48-AS,进而影响CD48的表达来阻碍Mo-DCs的成熟。

关 键 词:RNA  长链非编码  树突细胞  脂多糖类  CD48抗原  计算生物学  N-3-氧代十二烷酰-L-同型丝氨酸内    长链非编码RNA  CD48-AS  
收稿时间:2021-04-19
修稿时间:2021-09-18

3-O-C12-HSL hampers the maturation of Mo-DCs by inhibiting the expression of lncRNA CD48-AS and CD48
LUO Yan-fen,ZHUANG Qi-zhen,ZHANG Xuan,CHEN Cha,LIU Yang,YAN Xing-xing,XIAO Qian,LI You-qiang.3-O-C12-HSL hampers the maturation of Mo-DCs by inhibiting the expression of lncRNA CD48-AS and CD48[J].Tianjin Medical Journal,2021,49(12):1233-1239.
Authors:LUO Yan-fen  ZHUANG Qi-zhen  ZHANG Xuan  CHEN Cha  LIU Yang  YAN Xing-xing  XIAO Qian  LI You-qiang
Institution:1 Department of Laboratory Medicine, Guangdong Provincial Hospital of Traditional Chinese Medicine, Guangzhou 501180, China; 2 the Second Clinical Medical College of Guangzhou University of Traditional Chinese Medicine; 3 Department of Laboratory Medicine, He Xian Memorial Hospital, Southern Medical University △Corresponding Author E-mail: liyouqiang21@126.com
Abstract:Objective To screen and clarify the mechanism of long non-coding RNA CD48-AS (lncRNA CD48-AS) and the antisense complementary molecule CD48 in the process of N-3-oxododecanoyl-L-homoserine lactone (3-O-C12- HSL) hampering the maturation of human monocyte-induced dendritic cells (Mo-DCs). Methods Mo-DCs were extracted from the peripheral blood of healthy individuals, and the immature Mo-DCs were divided into three groups for lncRNA chip analysis: the negative control group (0.1% DMSO), the lipopolysaccharide (LPS) positive control group (100 μg/L LPS) and the treatment group (100 μg/L LPS+40 μmol/L 3-O-C12-HSL). The natural antisense lncRNA expressed more than 5 times in the lncRNA expression profile were screened for Cluster analysis. The natural antisense lncRNA CD48-AS was screened. Immature Mo-DCs were divided into the negative control group, the LPS positive control group, and the 3-O-C12-HSL treatment group (5, 10, 25 μmol/L 3-O-C12-HSL). The expression of lncRNA CD48-AS and antisense molecule CD48 were measured using quantitative PCR in each group. The complementary regions of lncRNA CD48-AS and CD48 and the protein coding function of lncRNA CD48-AS were analyzed through bioinformatics. Whether lncRNA CD48-AS affected the expression of CD48 by forming a dimer with CD48 was verified through the ribonuclease protection experiment (RPA). Preliminary experiments were carried out on the localization of lncRNA CD48-AS in cells. Results The lncRNA expression profile of Mo-DCs showed specific changes after 3-O-C12-HSL treatment. 3-O-C12-HSL down-regulated the expression of lncRNA CD48-AS and its antisense target molecule CD48 induced by LPS. Bioinformatics analysis showed that lncRNA CD48-AS was a non-coding RNA without protein coding function. lncRNA CD48-AS may form RNA dimers with CD48 to reduce the degradation of CD48 by RNase and increase the expression of CD48. lncRNA CD48-AS was mainly located in the nucleus in Mo-DCs, with less expression in cytoplasm. Conclusion 3-O-C12-HSL can inhibit the maturation of Mo-DCs by down-regulating lncRNA CD48-AS and then affecting the expression of CD48.
Keywords:RNA  long noncoding  dendritic cells  lipopolysaccharides  CD48 antigen  computational biology  N-3-  oxododecanoyl-L-homoserine lactone  lncRNA CD48-AS  
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