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鼻咽癌细胞株5-8F-EGFP和肝转移亚群5-8F-H3B-EGFP的基因表达谱分析
引用本文:韩春,杨俊兰,姚开泰. 鼻咽癌细胞株5-8F-EGFP和肝转移亚群5-8F-H3B-EGFP的基因表达谱分析[J]. 南方医科大学学报, 2011, 31(3): 473-477
作者姓名:韩春  杨俊兰  姚开泰
作者单位:韩春,杨俊兰,HAN Chun,YANG Jun-lan(解放军总医院肿瘤内科,北京,100853);姚开泰,YAO Kai-tai(南方医科大学肿瘤研究所,广东,广州,510515)
基金项目:国家高技术研究发展计划"863"
摘    要:
目的区分不同转移能力的鼻咽癌细胞亚群,对于探讨鼻咽癌转移的分子机制、脏器亲和性具有重要的临床和生物学意义。我们拟应用基因芯片技术来分析鼻咽癌细胞株5-8F-EGFP和肝转移亚群5-8F-H3B-EGFP的基因表达谱差异。方法分别提取鼻咽癌细胞株5-8F-EGFP和肝转移亚群5-8F-H3B-EGFP的总RNA,逆转录成荧光标记的cDNA,与Af-fymetrix Human Genome U133A 2.0寡核苷酸芯片杂交(每株重复3次),用专业的软件和聚类分析法分析基因表达谱。结果得到差异表达基因3767个,其中差异表达2倍以上的基因281个,进一步筛选出16个可能与鼻咽癌肝转移关系密切的基因16个。结论这16个基因能够很好的区分5-8F-EGFP和肝转移亚群5-8F-H3B-EGFP,为进一步寻找鼻咽癌肝转移的临床分子标志物、判断预后缩小了范围。

关 键 词:基因芯片  鼻咽癌  肝转移  基因表达谱

Gene expression profiling of nasopharyngeal carcinoma cell line 5-8F-EGFP and the liver metastatic 5-8F-H3B-EGFP cells
HAN Chun,YANG Jun-lan,YAO Kai-tai. Gene expression profiling of nasopharyngeal carcinoma cell line 5-8F-EGFP and the liver metastatic 5-8F-H3B-EGFP cells[J]. Journal of Southern Medical University, 2011, 31(3): 473-477
Authors:HAN Chun  YANG Jun-lan  YAO Kai-tai
Affiliation:HAN Chun1,YANG Jun-lan1,YAO Kai-tai2 1Department of Oncology,General Hospital of PLA,Beijing 100853,China,2Cancer Institute,Southern Medical University,Guangzhou 510515
Abstract:
Objective To compare the gene expression profiles of nasopharyngeal carcinoma(NPC) cell line 5-8F-EGFP and the liver metastatic 5-8F-H3B-EGFP cells.Methods The fluorescence-labeled cDNA were prepared separately from the total RNA extracted from the two cell lines and hybridized with Human_U133A2.0Genechip(Affymetrix,USA) containing approximately 18 400 known gene.The gene expression profiles were analyzed with special software and cluster analysis.Results A total of 3767 genes were identified to have signif...
Keywords:gene chip  nasopharyngeal carcinoma  liver metastasis  gene expression profiles  
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