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Genetic variations and haplotypes of ABCC2 encoding MRP2 in a Japanese population
Authors:Sai Kimie  Saito Yoshiro  Itoda Masaya  Fukushima-Uesaka Hiromi  Nishimaki-Mogami Tomoko  Ozawa Shogo  Maekawa Keiko  Kurose Kouichi  Kaniwa Nahoko  Kawamoto Manabu  Kamatani Naoyuki  Shirao Kuniaki  Hamaguchi Tetsuya  Yamamoto Noboru  Kunitoh Hideo  Ohe Yuichiro  Yamada Yasuhide  Tamura Tomohide  Yoshida Teruhiko  Minami Hironobu  Matsumura Yasuhiro  Ohtsu Atsushi  Saijo Nagahiro  Sawada Jun-ichi
Affiliation:Project Team for Pharmacogenetics, National Institute of Health Sciences, Tokyo, Japan. sai@nihs.go.jp
Abstract:
The multidrug resistance-associated protein 2 (MRP2) encoded by the ABCC2 gene is expressed in the liver, intestine and kidneys and preferentially exports organic anions or conjugates with glucuronide or glutathione. In this study, all 32 exons and the 5'-flanking region of ABCC2 in 236 Japanese were resequenced, and 61 genetic variations including 5 novel nonsynonymous ones were detected. A total of 64 haplotypes were determined/inferred and classified into five *1 haplotype groups (*1A, *1B, *1C, *1G, and *1H) without nonsynonymous substitutions and *2 to *9 groups with nonsynonymous variations. Frequencies of the major 4 haplotype groups *1A (-1774delG), *1B (no common SNP), *1C (-24C>T and 3972C>T), and *2 [1249G>A (Val417Ile)] were 0.331, 0.292, 0.172, and 0.093, respectively. This study revealed that haplotype *1A, which has lowered activity, is quite common in Japanese, and that the frequency of *1C, another functional haplotype, was comparable to frequencies in Asians and Caucasians. In contrast, the haplotypes harboring 3972C>T but not -24C>T (*1G group), which are reportedly common in Caucasians, were minor in Japanese. Moreover, the allele 1446C>T (Thr482Thr), which has increased activity, was not detected in our Japanese population. These findings imply possible differences in MRP2-mediated drug responses between Asians and Caucasians.
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