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基于网络药理学的酸枣仁与酸枣果肉抗失眠作用机制比较
引用本文:李金晶,刘红波,姚卓汝,唐志书,钱大玮,王梅,宋忠兴. 基于网络药理学的酸枣仁与酸枣果肉抗失眠作用机制比较[J]. 中国现代中药, 2022, 24(3): 466-475
作者姓名:李金晶  刘红波  姚卓汝  唐志书  钱大玮  王梅  宋忠兴
作者单位:1.陕西中医药大学/陕西中药资源产业化省部共建协同创新中心,陕西 咸阳 712083;2.秦药特色资源研究与开发国家重点实验室(培育)/陕西省创新药物研究中心,陕西 咸阳 712083;3.陕西中医药大学 附属医院,陕西 咸阳 712000;4.南京中医药大学/江苏省中药资源产业化过程协同创新中心,江苏 南京 210023
基金项目:中央本级重大增减支项目(2060302);陕西省技术创新引导专项(2018HJCG-21);咸阳市重大科技专项(2018k01-41)
摘    要:
目的:基于网络药理学比较酸枣仁与酸枣果肉抗失眠作用的物质基础及作用机制。方法:通过中药系统药理学数据库与分析平台(TCMSP)、BATMAN-TCM数据库、中医药百科全书数据库(ETCM)及文献等筛选酸枣仁与酸枣果肉的活性成分及靶点;通过GeneCards、美国国家生物技术信息中心(NCBI)数据库检索失眠疾病的靶点;将活性成分对应靶点与疾病靶点相互映射获取共同靶点,利用DAVID 6.8数据库对共同靶点进行基因本体(GO)功能过程和京都基因与基因组百科全书(KEGG)通路富集分析,预测其作用机制;通过Cytoscape 3.8. 0构建网络并对其进行拓扑分析,得到酸枣仁与酸枣果肉抗失眠的核心成分及核心靶点;比较酸枣仁与酸枣果肉抗失眠的异同点,通过分子对接方法进行间接验证。结果:筛选得到酸枣仁活性成分17个,靶点579个;酸枣果肉活性成分15个,靶点410个。筛选得到失眠疾病相关靶点2563个,映射得到酸枣仁与失眠疾病的共同靶点151个,酸枣果肉与失眠疾病的共同靶点116个。通过富集分析比较,酸枣仁与酸枣果肉均可通过槲皮素、棕榈酸等核心成分及磷脂酰肌醇3-激酶(PIK3CG)、肿瘤坏死...

关 键 词:网络药理学  酸枣仁  酸枣果肉  失眠  作用机制
收稿时间:2021-07-20

Comparison of Anti-insomnia Mechanism Between Ziziphi Spinosae Semen and Ziziphi Spinosae Fructus Based on Network Pharmacology
LI Jin-jing,LIU Hong-bo,YAO Zhuo-ru,TANG Zhi-shu,QIAN Da-wei,WANG Mei,SONG Zhong-xing. Comparison of Anti-insomnia Mechanism Between Ziziphi Spinosae Semen and Ziziphi Spinosae Fructus Based on Network Pharmacology[J]. Modern Chinese Medicine, 2022, 24(3): 466-475
Authors:LI Jin-jing  LIU Hong-bo  YAO Zhuo-ru  TANG Zhi-shu  QIAN Da-wei  WANG Mei  SONG Zhong-xing
Affiliation:1.Shaanxi University of Chinese Medicine/Shaanxi Collaborative Innovation Center of Chinese Medicinal Resources Industrialization, Xianyang 712083, China;2.State Key Laboratory of Research & Development of Characteristic Qin Medicine Resources (Cultivation)/ Shaanxi Innovative Drug Research Center, Xianyang 712083, China;3.The Affiliated Hospital of Shaanxi University of Chinese Medicine, Xianyang 712000, China;4.Nanjing University of Chinese Medicine/Jiangsu Collaborative Innovation Center of Chinese Medicinal Resources Industrialization, Nanjing 210023, China
Abstract:
Objective To compare the material basis and mechanism of Ziziphi Spinosae Semen and Ziziphi Spinosae Fructus in the treatment of insomnia based on network pharmacology.Methods The active components and targets of Ziziphi Spinosae Semen and Ziziphi Spinosae Fructus were screened from Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP), Bioinformatics Analysis Tool for Molecular mechanism of Traditional Chinese Medicine (BATMAN-TCM), and Encyclopedia of Traditional Chinese Medicine (ETCM) and relevant literature. The targets of insomnia were screened from GeneCards and NCBI database. The targets of active ingredients and insomnia were intersected to obtain the common targets. DAVID 6.8 was employed to conduct the gene ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment of the common target for predicting the mechanism of action. Cytoscape 3.8.0 was used to construct the "Chinese herbal medicine-component-target-pathway" network, and topological analysis of the network was then performed to identify the core components and core targets of Ziziphi Spinosae Semen and Ziziphi Spinosae Fructus for treating insomnia. Finally, molecular docking was carried out to verify the predicted mechanism.Results We screened out 17 active components and 579 targets of Ziziphi Spinosae Semen, 15 active components and 410 targets of Ziziphi Spinosae Fructus, and 2563 targets of insomnia. Insomnia shared 151 and 116 common targets with Ziziphi Spinosae Semen and Ziziphi Spinosae Fructus, respectively. Both Ziziphi Spinosae Semen and Ziziphi Spinosae Fructus can act on tumor necrosis factor (TNF) signaling pathway, dopaminergic synapse, serotonergic synapse, GABAergic synapse, and nuclear factor-kappa B signaling pathway via core components (e.g., quercetin and palmitic acid) and core targets [e.g., phosphoinositide-3-kinase (PIK3CG), TNF, and protein kinase B1 (Akt1)]. Molecular docking showcased that the active components had strong binding ability to targets.Conclusion This study preliminarily predicted and compared the mechanism of Ziziphi Spinosae Semen and Ziziphi Spinosae Fructus in the treatment of insomnia. The two medicinal materials have 7 common active components and 357 common targets and employ similar biological processes and signal pathways for treating insomnia. The findings indicate that Ziziphi Spinosae Semen and Ziziphi Spinosae Fructus have certain similarities in the treatment of insomnia, which provides a research basis for the comprehensive utilization of wild jujube resources.
Keywords:network pharmacology  Ziziphi Spinosae Semen  Ziziphi Spinosae Fructus  insomnia  mechanism
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