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HLA-A, -B, -DRB1, -DQA1, and -DQB1 polymorphism in thais
Authors:Dasnayanee Chandanayingyong  Henry A.F. Stephens   Rewadee Klaythong  Monchan Sirikong  Sudchai Udee  Panimon Longta  Rapeepun Chantangpol  Sasitorn Bejrachandra  Ekaraj Rungruang
Affiliation:

From the Department of Transfusion Medicine. Siriraj Hospital and Medical School. Mahidol University, Bangkok, Thailand

Abstract:
In this study we examined HLA-A, -B, -DRB1, -DQA1, and -DQB1 gene, allele, and haplotype frequencies in two ethnic Thai populations. We compared these frequencies to the known HLA class I and II allele profiles of non-Thai mainland and insular Southeast (SE) Asians. HLA-A locus gene and allele frequencies, are comparatively homogeneous in both Thai and non-Thai SE Asians. In contrast, HLA-B, -DRB1, -DQA1, and -DQB1 gene and allele frequencies, show more ethnic and geographic variation in SE Asians. Conserved haplotypes, or combinations of linked HLA class I and II alleles were detected in Thais, but at relatively low frequencies. It would appear that ethnic Thais, reflect an admixture of peoples from both the northern mainland and southern island groups of SE Asia.
Keywords:Abbreviations: AF, allele frequency   AH, ancestral or extended haplotype   DL, Dai Lue   11IHWS 11th, International Histocompatibility Workshop   GF, gene frequency   HF, haplotype frequency   HIV-1, human immunodeficiency virus   NE, northeast pc corrected p value   PDT, present-day Thai   RFLP, restriction fragment length polymorphism   S, southern   SE, southeast   Sing.C, Singapore Chinese   SSO, sequence-specific oligonucleotide   Viet, Vietnamese
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