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Conformational features responsible for the binding of cyclic analogues of enkephalin to opioid receptors
Authors:GREGORY V NIKIFOROVICH  ALEXANDER A GOLBRAIKH  MARK D SHENDEROVICH  JURIS BALODIS
Abstract:Models of μ- and δ-receptor-bound backbone conformations of enkephalin cyclic analogues containing Phe4 were determined by comparing geometrical similarity among the previously found low-energy, backbone structures of inline image-enkephalinamide, inline image-enkephalinamide, inline image-enkephalin and inline image-enkephalin. The present μ-receptor-bound conformation resembles a β-I bend in the peptide backbone centred on the Gly3-Phe4 region. Two slightly different models were found for the δ-receptor-bound conformation; both of them are more extended than the μ-receptor-bound conformation and include a γ-turn (or a γ-like turn) on the Gly3 residue. Energetically favourable rotamers of Tyr and Phc side chains were also determined for the μ- and δ-conformations. The present models of μ- and δ-conformations share geometrical similarity with the low-energy structures of Leu-enkephalin and the inline image analogue.
Keywords:enkephalin cyclic analogues  receptor-bound conformation  receptor selectivity
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