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8q24 and 17q Prostate cancer susceptibility loci in a multiethnic Asian cohort
Authors:Jason Yongsheng Chan  Huihua Li  Onkar Singh  Anupama Mahajan  Saminathan Ramasamy  Koilan Subramaniyan  Ravindran Kanesvaran  Hong Gee Sim  Tsung Wen Chong  Yik-Ying Teo  Sin Eng Chia  Min-Han Tan  Balram Chowbay
Affiliation:1. Department of Medical Oncology, National Cancer Centre, Singapore;2. Department of Clinical Research, Singapore General Hospital, Singapore;3. Laboratory of Clinical Pharmacology, Division of Medical Sciences, Humphrey Oei Institute of Cancer Research, National Cancer Centre, Singapore;4. Department of Urology, Singapore General Hospital, Singapore;5. NUS Graduate School for Integrative Science and Engineering, National University of Singapore, Singapore;6. Genome Institute of Singapore, Agency for Science, Technology and Research, Singapore;7. Department of Statistics and Applied Probability, National University of Singapore, Singapore;8. Department of Epidemiology and Public Health, National University of Singapore, Singapore;9. Institute of Bioengineering and Nanotechnology, Singapore
Abstract:
ObjectivesRecently, several genome-wide association studies have demonstrated a cumulative association of 5 polymorphic variants in chromosomes 8q24 and 17q with prostate cancer (CaP) risk in Caucasians, particularly those harboring aggressive clinicopathologic characteristics. The purpose of this study was to evaluate the influence of these variants on CaP susceptibility in Singaporean Asian men.Materials and methodsWe performed a case-control study in 289 Chinese CaP patients and 412 healthy subjects (144 Chinese, 134 Malays, and 134 Indians), and examined the association of the 5 single nucleotide polymorphisms (SNPs) with CaP.ResultsIn the healthy subjects, rs16901979 A-allele frequency was highest amongst Chinese (0.32) compared with Malays (0.13; P < 0.0001) or Indians (0.09; P < 0.0001); rs6983267 G-allele was highest in Indians (0.51) compared with Chinese (0.42; P = 0.041) or Malays (0.43; P = 0.077); whereas rs1859962 G-allele frequency was highest amongst Indians (0.56) compared with Chinese (0.40; P = 0.0002) or Malays (0.38; P < 0.0001). Individuals with the rs4430796 TT genotype were at increased CaP risk in the Chinese via a recessive model (odds ratios (OR) = 1.56, 95% CI = 1.04–2.33). Significant associations were observed for rs4430796 TT with Gleason scores of ≥7 (OR = 1.76, 95% CI = 1.14–2.73) and prostate-specific antigen (PSA) levels of ≥10 ng/ml at diagnosis (OR = 1.63, 95% CI = 1.01–2.63), as well as for rs6983267 GG with stage 3–4 CaPs (OR = 1.91, 95% CI = 1.01–3.61). A cumulative gene interaction influence on disease risk, which approximately doubled for individuals with at least 2 susceptibility genotypes, was also identified (OR = 2.18, 95% CI = 1.10–4.32).ConclusionsThis exploratory analysis suggests that the 5 genetic variants previously described may contribute to prostate cancer risk in Singaporean men.
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