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Protective variant for hippocampal atrophy identified by whole exome sequencing
Authors:Kwangsik Nho  Sungeun Kim  Shannon L. Risacher  Li Shen  Jason J. Corneveaux  Shanker Swaminathan  Hai Lin  Vijay K. Ramanan  Yunlong Liu  Tatiana M. Foroud  Mark H. Inlow  Ashley L. Siniard  Rebecca A. Reiman  Paul S. Aisen  Ronald C. Petersen  Robert C. Green  Clifford R. Jack  Michael W. Weiner  Clinton T. Baldwin  Kathryn L. Lunetta  Lindsay A. Farrer    Simon J. Furney  Simon Lovestone  Andrew Simmons  Patrizia Mecocci  Bruno Vellas  Magda Tsolaki  Iwona Kloszewska  Hilkka Soininen    Brenna C. McDonald  Martin R. Farlow  Bernardino Ghetti    Matthew J. Huentelman  Andrew J. Saykin  
Abstract:We used whole‐exome sequencing to identify variants other than APOE associated with the rate of hippocampal atrophy in amnestic mild cognitive impairment. An in‐silico predicted missense variant in REST (rs3796529) was found exclusively in subjects with slow hippocampal volume loss and validated using unbiased whole‐brain analysis and meta‐analysis across 5 independent cohorts. REST is a master regulator of neurogenesis and neuronal differentiation that has not been previously implicated in Alzheimer's disease. These findings nominate REST and its functional pathways as protective and illustrate the potential of combining next‐generation sequencing with neuroimaging to discover novel disease mechanisms and potential therapeutic targets. Ann Neurol 2015;77:547–552
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