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《Drug discovery today》2022,27(10):103323
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Introduction: Cholangiocarcinoma (CCA) is the second most common type of primary liver cancer. Several factors, such as epigenetic changes in promoter genes, gene expression, and microRNAs (miR), can contribute to genomic instability in cancer. This study aimed at evaluating the expression of VEGF, miRs 145-3p, and 101-3p in patients with CCA and their potential as biomarkers for diagnosis and prognosis of CCA. Material and methods : Sixty two patients were studied. Out of these 62 patients, 41 cases had confirm CCA and 21 cases had hepatopathies complications. The RNA was extracted from a paraffined tissue block, and then the synthesis of cDNA was performed. The analysis of the expression of VEGF, miR-145-3p, and miR-101-3p was carried out by polymerase chain reaction in real time.  Results: The findings revealed that miRs 145-3p and 101-3p were under expressed in the case group compared to the control group (0.46; 0.17; P = 0.0001, respectively). VEGF was overexpressed in the case group compared to the control group (11.8; P = 0.0001). An increase in miR-145-3p expression level was observed in patients with perihilar CCA compared to those with distal CCA (0.51 ± 0.41; 0.17 ± 0.13; P = 0.0698). Survival rate analysis showed that 41.9% of patients with intrahepatic CCA and 31.5% of patients with extrahepatic CCA were free from death within 11 months, leading to a significant difference (P> 0.05). Conclusion: The underexpression of miRNAs, tumor suppressors, the overexpression of VEGF, smoking, and aging were associated with CCA based on our findings. It seems that the reduced expression of the studies miRNAs and increased expression of VEGF can contribute to a decrease in survival rate of patients with tumor in their intrahepatic bile ducts.  相似文献   
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目的构建基于微小RNA(miRNA)表达的预测乳头状甲状腺癌(papillary thyroid carcinoma,PTC)患者预后的生存模型。方法从TCGA数据库官方网站上下载PTC miRNA测序数据和患者的临床资料,利用R3.6.0软件中的edgeR包筛选表达失调的miRNA。利用单因素Cox及Lasso回归分析筛选出与患者预后相关的miRNA(P<0.05),进一步使用多因素Cox回归分析建立预后模型的风险评分方程risk score,构建生存预后模型,使用受试者工作特征曲线(ROC)来评价模型的敏感度和特异性。结果与正常甲状腺组织相比,PTC组织中失调表达的miRNA共有75个(|log foldchange|≥2,FDR<0.05),多因素Cox回归分析最终得到基于8个miRNA(hsa-mir-6730、hsa-mir-4709、hsa-mir-196a-2、hsa-mir-146b、hsa-mir-6860、hsa-mir-509-3、hsa-mir-513c、hsa-mir-515-1)的预测患者预后的风险模型。ROC曲线下面积(AUC)分析显示,该模型具有较好的敏感度和特异性(AUC>0.8)。结论成功构建了基于miRNA表达的风险预测模型,该模型可有效预测PTC患者的预后。  相似文献   
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背景与目的:有研究表明长链非编码RNARUSC1-AS1(lnc RNARUSC1-AS1)与肿瘤的恶性生物学行为密切相关,但其对肝细胞癌(肝癌)的影响尚不清楚。笔者前期研究显示,lnc RNARUSC1-AS1与微小RNA-326(mi R-326)存在结合位点,因此本研究探讨lnc RNARUSC1-AS1在肝癌中的表达,以及是否通过靶向mi R-326调控肝癌细胞生物学行为。方法:用q RT-PCR检测41例肝癌组织和对应癌旁组织中lnc RNARUSC1-AS1与mi R-326的表达。以lnc RNARUSC1-AS1表达抑制质粒/阴性对照质粒、mi R-326模拟物/阴性对照序列、mi R-326抑制物/阴性对照序列为工具,采用MTT法、Transwell法、流式细胞术、Westernblot法观察接受不同转染处理的MHCC97-H细胞的增殖能力、迁移和侵袭能力、凋亡以及相关蛋白表达的变化。采用荧光素酶报告实验分析lnc RNARUSC1-AS1和mi R-326的靶向关系,并用q RT-PCR验证。结果:与癌旁组织比较,肝癌组织中lnc RNARUSC1-AS1表达水平明显升高,mi R-326表达水平明显降低(均P0.05)。转染lnc RNARUSC1-AS1表达抑制质粒或mi R-326模拟物后,肝癌MHCC97-H细胞的增殖能力以及迁移与侵袭能力明显降低,细胞凋亡率明显升高,cyclinD1、MMP-2、MMP-9、Bcl-2蛋白表达水平明显降低,P21、Bax蛋白表达水平明显升高(均P0.05)。MHCC97-H细胞转染lnc RNARUSC1-AS1表达抑制质粒的同时mi R-326抑制物,前者对MHCC97-H细胞以上作用被取消(均P0.05)。双荧光素酶报告实验及q RT-PCR验证结果显示,mi R-326为lnc RNARUSC1-AS1的靶分子。结论:lnc RNARUSC1-AS1在肝癌中表达上调,其可通过靶向调控mi R-326的表达促进肝癌细胞的恶性生物学行。  相似文献   
5.
微小RNA(miRNA)是一类非编码的小分子RNA,是基因表达的转录后调控因子。简述了多种慢性肝病,包括代谢功能障碍相关性脂肪性肝病、慢性乙型肝炎、慢性丙型肝炎、慢性药物性肝损伤、肝硬化以及肝细胞癌的相关病因,归纳了近年来关于miR-125b通过靶向不同的靶基因,进入不同的信号转导途径而在同一肝病或病理进程中发挥着相同或相悖的调控作用的相关报道,以期为多种慢性肝病的发病机制研究和非创伤性鉴别手段的建立提供相关见解。  相似文献   
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【目的】探讨子宫内膜异位症(Endometriosis,EMT)患者血清miRNA-93水平与不孕的相关性。【方法】选取2017年1月至2018年12月在本院妇科诊治的EMT患者98例(观察组),其中合并不孕症患者58例.未合并不孕症患者40例,美国生殖医学学会(American Society for Reproductive Medicine,ASRM)分期I期55例,D期31例,ID期8例,W期4例;另外选取同期在本院行常规妇科检查的育龄期健康妇女115例作为对照组。采用实时荧光定量聚合酶链反应(qRT-PCR)检测血清miRNA-93表达水平;采用受试者工作曲线(receiver operating characteristic,R0C)评估miRNA-93对EMT合并不孕的诊断价值;采用Logistic回归分析不孕的危险因素。【结果】观察组miRNA-93相对表达量为0.24±0.09,显著低于对照组的0.31±0.12,其差异具有统计学意义(t=—4.747,P<0.05)。EMT患者不孕者血清miRNA-93表达水平为0.21±0.06,显著低于非不孕者的0.28±0.11,其差异有统计学意义(r=-4.055,P=0.001)。EMT患者中ASRM分期Ⅰ期、Ⅱ期、Ⅲ期、IV期的miRNA-93相对表达量为0.21±0.07、0.25±0.06、0.34±0.08、0.38±0.04,随着ASRM分期的升高,miRNA-93表达水平下降,不同分期比较差异具有统计学意义(F=16.659,P<0.05)。ROC曲线分析显示:miRNA-93预测EMT合并不孕的最佳临界点为0.28,灵敏度为93.24%,特异度为55.32%,曲线下面积(AL7C)为0.695。多因素Logistic回归分析结果显示:miRNA-93是EMT患者不孕的独立危险因素。【结论】EMT患者血清miRNA-93表达水平下降,且下降程度与患者病情分期一致,合并不孕的EMT患者血清miRNA-93表达水平显著低于非不孕患者,这提示血清miRNA-93对于评估EMT疾病进展和不孕具有一定价值。  相似文献   
8.
环状RNA(circular RNA,circRNA)是一种在人体内广泛存在的不具有5′端帽子和3′端尾巴的共价闭合环状非编码RNA,较线性RNA更具稳定性,组织特异性强,在正常组织及肿瘤组织中的表达有显著差异,其特殊的分子生物学功能尤其是微小RNA(microRNA,miRNA)分子海绵作用,使其有望成为新的肿瘤标志物和分子靶向治疗靶标。近年研究发现circRNA可以通过多种机制调控恶性肿瘤的增殖与转移,在恶性肿瘤的早期诊断、治疗、预后以及肿瘤对放化疗敏感性等方面有指导作用。但是,目前circRNA在卵巢癌中的功能和调控机制研究尚处于初始阶段,仅有少量的报道和研究。综述circRNA的分子生物学功能及其在卵巢癌中的功能和调控机制。  相似文献   
9.
目的:探讨miR-105-5p在胃癌(GC)中的表达情况、临床意义及生物学功能及其潜在的作用机制。方法:应用real-time PCR检测miR-105-5p在GC组织与癌旁组织以及不同GC细胞(MGC-803,MKN-1,SGC-7901,BGC-823和AGS)与正常胃黏膜细胞(GES-1)中的表达;分析miR-105-5p的表达与GC临床病理特征及患者预后的关系;采用Transwell迁移和侵袭实验以及MTT实验检测miR-105-5p对GC细胞迁移与侵袭能力以及增殖能力的影响;应用生物信息学工具预测miR-105-5p的下游靶点,并应用荧光素酶报告实验以及Western blot分析miR-105-5p对靶点的调节作用。结果:miR-105-5p在GC组织的表达明显高于癌旁组织,在各GC细胞中的表达均明显高于正常胃黏膜细胞(均P0.05)。miR-105-5p的表达水平与肿瘤大小(P=0.020)和远处转移(P=0.004)明显有关;miR-105-5p低表达GC患者的总体生存率明显高于miR-105-5p高表达组的患者(P=0.001 8)。选择miR-105-5p表达量相对较低的BGC-823细胞和相对较高的MKN-1细胞,分别转染miR-105-5p模拟物和miR-105-5p抑制物,转染后结果显示,BGC-823细胞的迁移、侵袭和增殖能力明显增强,而MKN-1细胞的迁移、侵袭和增殖能力明显抑制(均P0.05)。生物信息学分析发现,DIRAS家族GTP结合RAS样3(DIRAS3)可能是miR-105-5p的作用靶点;荧光素酶报告实验显示,miR-105-5p能够负向调节DIRAS3-3'UTR的荧光素酶活性;Western blot显示,转染miR-105-5p模拟物的BGC-823细胞中DIRAS3的表达明显下调,转染miR-105-5p抑制物的MKN-1细胞DIRAS3的表达明显上调(均P0.05)。结论:miR-105-5p在GC中表达升高,其可能通过靶向作用于DIRAS3增强GC细胞的迁移、侵袭及增殖,进而促进GC的发生发展。  相似文献   
10.
Objective To compare the expression level of exosomal miR-503 in peritoneal dialysis effluent (PDE) from patients of different peritoneal transport characteristics, predict the target genes of miR-503 and provide bioinformatic data for researches of peritoneal transport characteristics. Methods Twenty-four stable peritoneal dialysis (PD) patients were selected and divided into high transport group (H group, n=12) and low transport group (L group, n=12) according to the results of peritoneal equilibration tests (PET). The 500 ml PDE that was left on the patient's abdomen overnight was collected and concentrated using ultrafiltration cell. Exosomes in PDE were resuspended in phosphate buffered saline (PBS) after ultracentrifugation and the characteristics of PDE exosomes were identified by transmission electron microscope (TEM), nanoparticle tracking analysis (NTA), Western blotting and fluorescent staining. MicroRNAs were extracted from PDE exosomes. The expression levels of PDE exosomal miR-503 in the two groups were detected by quantitative real-time PCR. Then the relations between the relative quantity of PDE exosomal miR-503 and PET values or 24 h ultrafiltration volume (UF) were analyzed. Targetscan and miRDB databases were used to predict the target genes of miR-503. Gene ontology (GO) functional enrichment and Kyoto encyclopedia of genes and genomes (KEGG) signaling pathway analysis were relied on DAVID (https://david.ncifcrf.gov/). Results The exosomes in PDE showed a round and cup-shaped morphology under TEM, and the diameters were approximately 100 nm measured by NTA. The specific biomarkers of exosomes, CD63, CD81 and heat shock protein -70 (HSP-70) were all detected by Western blotting. The internalization and uptake of the exosomes was observed after fluorescent staining. The relative expression level of PDE exosomal miR-503 in H group was found to be significantly higher than that in L group (P=0.002), and the relative quantity of PDE exosomal miR-503 was significantly positively correlated with PET values (r=0.547, P=0.006), but not 24 h UF (r=-0.297, P=0.159). There were 156 target genes of miR-503 in total that could be predicted by two different databases at the same time. GO analysis of these 156 target genes was mainly focused on kinase binding, regulation of protein modification and catabolic process as well as regulation of epithelial cell proliferation. KEGG enriched many tumor associated or classical signaling pathways, including transforming growth factor-β (TGF-β) signaling pathway and vascular endothelial growth factor (VEGF) signaling pathway. The prediction showed that vascular endothelial growth factor A (VEGFA) was a direct target gene of miR-503 and it was also related to many proteins involved in fibrosis mechanism. Conclusions The expression level of PDE exosomal miR-503 is significantly higher in H group, and positively correlates with PET values, which may regulate the angiogenesis of peritoneal vessels by targeting VEGFA.  相似文献   
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