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1.
应用PCR-SSO方法,对华东地区汉族人群进行了HLA-DQA1、-DQB1和DRB1*02,07,09基因分型。DQA1中以DQA1*0301基因频率最高(0.3844),其次为*0501(0.1406)和0102(0.1219),*0401最低(0.0281);DQB1中以DQB1*0303基因频率最高(0.2342),其次为*0301(0.1899)、*0601(0.1203)和*0201(0.1108),*0501、*0604和*0605最低(均为0.0127);DR9基因频率较高(0.2310),DR2中DRB1*1501占73%,基因频率为0.0854,未见*1601。DQA1、DQB1及DRB1等位基因之间存在显著的连锁不平衡。DRB1*0901-DQA1*0301-DQB1*0303、DQA1*0103-DQB1*0601等为常见单倍型。本资料与我国其他汉族人群资料有可比性,也存在一定差异。  相似文献   

2.
The association of HLA class II alleles with multiple sclerosis (MS) has been amply documented. In the present study, the role of HLA class II (DRB1, DQA1 and DQB1) alleles and haplotypes was investigated in 43 unrelated Iranian chronic progressive multiple sclerosis (CP-MS) patients compared with 100 healthy individuals. HLA typing for DRB1, DQA1 and DQB1 was performed by restriction fragment length polymorphism (RFLP). Subtypes of DR4, DR15 and DR16 were defined using polymerase chain reaction (PCR) amplification with sequence-specific primers (PCR-SSP). The results show that, among DR2-positive MS patients and the control group, a positive association with the DRB1*1503, DQA1*0102, DQB1*0602 haplotype (21% vs. 2.7%, P=0.057, RR=9.8) and a negative association with the most frequent DR15 haplotype in the control group, DRB1*15021, DQA1*0103, DQB1*0601 (7% vs. 24.3%, P=0.001), were observed. No significant association was found with the analysed HLA-DRB1, DQA1 and DQB1 alleles.  相似文献   

3.
Genetic susceptibility to insulin-dependent diabetes mellitus (IDDM) has been shown to be associated with MHC in many studies. To extend this data with a population with relatively low IDDM incidence, MHC DRB, DQA, and DQB have been investigated by polymerase chain reaction and sequence specific oligonucleotide probe hybridization (PCR/SSO) in 178 IDDM patients from Turkey and compared to 248 healthy controls. Significant differences are detected between IDDM and control groups in the frequencies of DRB1*0402 DQA1*03 DQB1*0302 (28.1% vs. 5.2%, p < 0.0001, OR: 7.1) and DRB1*0301 DQA1*0501 DQB1*02 (57% vs. 18.1%, p < 0.0001, OR: 6.1). Among the negative associations, the most strong ones are with DRB1*1401 DQA1*0101 DQB1*0503 (0.6% vs. 8.9%, p < 0.0001, OR: 0.1), DRB1*1502 DQA1*0103 DQB1*0601 (1.1% vs. 7.7%, p = 0.0023, OR: 0.1), DRB1*1301 DQA1*0103 DQB1*0603 (0.6% vs. 6.9%, p = 0.0039, OR: 0.2) and DRB1*1101 DQA1*0501 DQB1*0301 (3.9% vs. 12.1%, p < 0.0001, OR: 0.2). When the DRB, DQA or DQB genotypes of the susceptible alleles are compared, the most strong susceptibility marker of the disease is found to be DRB1*0301/*04 (31.4% vs. 2.8%, p < 0.0001, OR: 15.8) and among these, heterozygote genotype DRB1*0301/*0401 (4.5% vs. 0, p = 0.0008, OR: 24.8).These results confirm the positive associations with IDDM previously observed in other Caucasian populations and reveal many negative and strong associations which maybe underlining several characteristics that distinguish Turkish diabetics form other Caucasians.  相似文献   

4.
黄立东  王元 《现代免疫学》1999,19(5):277-279
本文采用PCR RFLP技术对抗磷脂抗体阳性(APA+)SLE患者HLA DRB1、DQA1 和DQB1 基因进行分型研究, 同时以上海地区汉族随机人群作对照, 发现这类病人的DRB1* 0803 DQA1* 0103 DQB1 *0601 单倍型频率显著增高( P< 0-01) 相对危险率为4-45, 说明该疾病与此单倍型存在着很强的关联。  相似文献   

5.
We have investigated polymorphism in the 5′-URR of the DQA1 gene by PCR-SSO method in a group of 55 Italian healthy individuals olygotyped for DRB1, DQA1, DQB1 genes and in 20 10th IHWS cell lines as controls. We used primers and oligos (X and Y box) supplied by 12th IHWS and a DIG-11-ddUTP/AMPPD method. We have detected eight QAP variants (1.1,1.2,1.3,1.4,2.1,3.1,4.1,4.2) in our samples. As far as the association of DR/DQ haplotype and QAP sequences, we observed cases of one to one relationship (DQA1*0201 and QAP2.1, DQA1*0301 and QAP3.1, DQA1*0401 and QAP4.2, DQA1*0501 and QAP4.1); cases in which the same QAP allele was present in different DQA1-DRB1 haplotypes (QAP1.2 with DQA1*0102 in DRB1*15-DQB1*0602 and DRB1*16-DQB1*0502 haplotypes or with DQA1*0103 in the DRB1*15-DQB1*0601 haplotypes; QAP1.3 linked to DQA1*0102, DQA1*0103 or DQA1*0104 in different haplotypes; QAP4.1 linked to DQA1*0501 in DRB1*11-DQB1*0301, DRB1*0301-DQB1*0201, DRB1*1303-DQB1*0301 haplotypes or to DQA1*0601 in DRB1*0803-DQB1*0301); cases where the same DQA1 allele is associated with different QAP sequences according to the DRB1 specificity (DQA1*0102 allele with QAP1.2 or QAP1.4 in DRB1*1302). Besides, we have observed that the QAP1.3, previously reported associated with DQA1*0101-DRB1*1401 haplotype, is really linked to DQA1*0104-DRB1*1401 haplotype. An intriguing data is that sometimes the same QAP is linked to different DQA1 alleles but to the same generic DRB1 allele: DRB1*02 haplotype includes always the QAP1.2 variant but can bring different DQA1 alleles (*0102 or *0103) and DRB1*08 haplotype has always the QAP4.2 variant with different DQA1 alleles (*0401 or *0601). The variability of linkage QAP-DQA1 can give further informations about HLA susceptibility in autoimmune diseases and in regulation of immune response in transplantation and oncology.  相似文献   

6.
Using polymerase chain reaction and Dig-ddUTP labeled oligonucleotides we have investigated the DNA polymorphism for the DQB1 promoter region (QBP) and we have deduced four point haplotypes in 65 unrelated healthy individuals of the Dai minority population. A total of 8 QBP alleles were detected. The most frequent allele is QBP 5.11 with 87.7% allele frequency followed by QBP 3.21, 3.1, 5.12 with 33.8%, 23.1% and 15.4% allele frequency respectively. Four QBP alleles, 3.22, 3.32, 4.1 and 6.12 were absent in the Dai minority. The linkage disequilibrium of the QBP allele with certain DQB1 alleles was very strong. Complete positive association was found for QBP 2.1-DQB1*0201, QBP3.1-DQB1*0301, QBP6.11-DQB1*0601. A total of 32 different four point haplotypes were deduced. Among them the most common haplotypes were DRB1*1602, DQA1*0102, QBP5.11; DQB1*0502, DRB1*1602-QBP5.11, DQA1*0102, DQB1*0502 (N = 19); DRB1*09 DQA1*03, QBP3.21, DQB1*03032 (N = 5); DRB1*1401, DQA1*01, QBP5.11, DQB1*0502 (N = 12) and DRB1*1202, DQA1*0601, QBP3.1, DQB1*0301 (N = 10). We conclude from these data that a) there is a reduced class II polymorphism in the Dai minority population an b) the relationship between QBP and DQB1 alleles is not different from that observed in other populations.  相似文献   

7.
Sixty-four patients with Takayasu arteritis and 317 healthy individuals in the Japanese population were examined for HLA-A, -B and -C alleles by serological typing and for HLA-DR, DQ and DP alleles by DNA typing using PCR/SSOP analysis. The frequencies of HLA-Bw52, DRB1*1502, DRB5*0102, DQA1*0103, DQB1*0601 and DPB1*0901 alleles were significantly increased and the frequencies of HLA-Bw54, DRB1*0405, DRB4*0101, DQA1*0301, DQB1*0401 alleles were significantly decreased. Strong linkage disequilibria among the increased alleles and among the decreased alleles were evident in the Japanese population. Therefore, the combination or haplotype of HLA-Bw52-DRB1*1502-DRB5*0102-DQA1*0103-DQB1*0601 -DPA1*02-DPB1*0901 may confer susceptibility to Takayasu arteritis while another combination or haplotype of HLA-Bw54-DRB1*0405-DRB4*0101-DQA1*0301-DQB1++ +*0401 may confer resistance to the disease. Because this is the first evidence for the association between an HLA-DP allele and Takayasu arteritis, we examined the nucleotide sequences of the DPB1*0901 allele from a patient and her healthy relatives and found no difference. The disease is therefore not caused by a mutated DPB1 gene.  相似文献   

8.
目的:了解白族人群人类白细胞抗原(Human leukocyte antigen,HLA) Ⅱ类基因-DRB1、-DQB1位点的遗传多态性.方法:采用PCR-SSP方法对124名云南大理洱源白族健康个体进行HLA-DRB1、-DQB1等位基因分型.结果:共检出21种DRB1等位基因,15种DQB1等位基因.其中主要的等位基因有DRB1*1202(26.61%)、DRB1*0901(13.89%)、DRB1*0803(9.92%)、DQB1*0301(31.45%)、DQB1*0601(10.08%)和DQB1*0401(8.06%).主要单倍型包括DRB1*1202-DQB1*0301(20.08%)和DRB1*0803-DQB1*0601(7.19%).结论:大理白族同其他10个民族群体HLA-DRB1、DQB1频率比较和聚类分析显示大理白族属于中国南方人群,但与其他群体存在一定的遗传距离,有着独特的HLA基因特性,对群体遗传及疾病相关性研究具有参考意义.  相似文献   

9.
应用PCR-RFLP核苷酸分型方法,探讨了我国南方浙江沪汉族人群HLA-DQB1基因多态性与系统红斑狼疮(SLE)的遗传关联性,对48例SLE患者的血样分析表明,SLE患者具有显著高的DQB1*0601等位基因频率(30.21%,RR=2.8919,Pcarr=0.0112,EF=0.20),DQB1*0601可能是一易感基因,而DQB1*0301(2.08%,RR=0.1108,Pcorr=0,  相似文献   

10.
Kim HS  Park MH  Song EY  Park H  Kwon SY  Han SK  Shim YS 《Human immunology》2005,66(10):1074-1081
Only 10% of persons infected with Mycobacterium tuberculosis develop clinical tuberculosis (TB), indicating the existence of host genetic factors regulating disease expression. We investigated the association of human leukocyte antigen (HLA) class II genes with the susceptibility to pulmonary TB in Koreans, with special emphasis on their association with drug resistance, disease severity, and disease recurrence. Human leukocyte antigens (HLA)-DRB1 and -DQB1 gene polymorphisms were analyzed in 160 Korean patients with pulmonary TB and 200 ethnically matched healthy controls. HLA-DRB1*0803 (25.0% vs. 14.5% in controls, OR = 1.97, p = 0.012, corrected p (p(c)) > 0.05) and DQB1*0601 (27.5% vs. 15.5% in controls, OR = 2.07, p = 0.005, p(c) > 0.05) were weakly associated with general susceptibility to TB. DRB1*0803 was significantly associated with drug resistance (30.9% vs. 14.5%, OR = 2.63, p(c) = 0.047) and more advanced lung lesion (29.8% vs. 14.5%, OR = 2.50, p(c) = 0.022). DRB1*0803 showed the strongest association with disease recurrence, especially after curative treatment for the earlier infection (47.4% vs. 14.5%, OR = 5.31, p(c) = 0.00009). DQB1*0601, which is strongly linked to DRB1*0803 in this population showed similar changes in the patients as those of DRB1*0803. It is suggested that DRB1*0803 and DQB1*0601 alleles are associated with disease progression of TB in Koreans, exerting influence on the development of drug resistance, severe disease, and recurrent disease.  相似文献   

11.
Abstract: We performed HLA-DQA1, -DQB1 and -DRB1 genotyping using the PCR-RFLP (polymerase chain reaction-restriction fragment length polymorphism) method for 32 Japanese pemphigus vulgaris (PV) patients. There was a significant association of either DQB1*0503 or DRB1*1405 with PV, and a negative association of either DQA1*0103 or DQB1*0601 with PV was found. Since the DQB1*0503+ patients had various DR14-related alleles, we concluded that the association with DQB1 is primary and that the association with DRB1 is simply due to linkage disequilibrium between the DQ and DR genes. These results may indicate that specific HLA class II antigens confer the susceptibility to PV among Japanese.  相似文献   

12.
The DQB1*06011 allele first classified and registered with the codon ACC at position 51(1) was recently corrected to ACG by Dr. Akinori Kimura (2) and in independently confirmed in our laboratory (3). The correct nucleotide sequence for this allele is shown below. The DQB1*06011 allele was found in two sisters of Turkish nationality who had been serologically typed for class I as HLA-A11, A33, B44, B52, Cw4. Nucleotide sequencing based typing of HLA class II alleles disclosed DRB1*0701, *15021, DRB4*01011/*0103, DRB5*0102, DQA1*0103, *0201, DQB1*02, *06011, DPB1*0401,*11011.  相似文献   

13.
On the basis of data collected during the 12th International Histocompatibility Workshop, we postulated a possible linkage disequilibrium between the TAP1C allele and the DRB1*1104-DQA1*0103-DQB1*0603 haplotype characteristic of Ashkenazi Jews. In order to confirm and extend this preliminary observation, a group of 34 subjects carrying this haplotype was analysed for TAP1 and TAP2 polymorphisms and compared with two control groups sharing either the DRB1 or the DQA1 and DQB1 alleles with the test group. The TAP1*0301 and TAP2D alleles were found to be strongly associated with the entire haplotype, but not with the DRB1*1104 or the DQA1*0103-DQB1*0603 alleles when carried separately. These data show a strong linkage disequilibrium of TAP1*0301 and TAP2D alleles with the DRB1*1104-DQA1*0103-DQB1*0603 haplotype of Ashkenazi Jews, extended on the centromeric and telomeric side to the DPB1*0201 and A1-B35 alleles, respectively.  相似文献   

14.
On the basis of data collected during the 12th International Histocompatibility Workshop, we postulated a possible linkage disequilibrium between the TAP1C allele and the DRB1*1104-DQA1*0103-DQB1*0603 haplotype characteristic of Ashkenazi Jews. In order to confirm and extend this preliminary observation, a group of 34 subjects carrying this haplotype was analysed for TAP1 and TAP2 polymorphisms and compared with two control groups sharing either the DRB1 or the DQA1 and DQB1 alleles with the test group. The TAP1*0301 and TAP2D alleles were found to be strongly associated with the entire haplotype, but not with the DRB1*1104 or the DQA1*0103-DQB1*0603 alleles when carried separately. These data show a strong linkage disequilibrium of TAP1*0301 and TAP2D alleles with the DRB1*1104-DQA1*0103-DQB1*0603 haplotype of Ashkenazi Jews, extended on the centromeric and telomeric side to the DPB1*0201 and A1-B35 alleles, respectively.  相似文献   

15.
We have investigated the polymorphism of the DQA1 promoter region (QAP) and we have deduced four point (DRB1, QAP, DQA1, DQB1) haplotypes of 60 unrelated healthy Dai minority individuals using the polymerase chain reaction and Dig-ddUTP labeled oligonucleotides. A total of eight QAP alleles (QAP1.1, 1.2, 1.3, 1.4, 3.1, 3.2, 4.1 and 4.2) were detected and two QAP alleles, QAP1.5 and QAP2.1 were absent in this population. The most predominant allele was QAP1.2 with 80% allele frequency. We also found that QAP alleles are in strong linkage disequilibrium with certain alleles of the neighboring loci DQA1 and DQB1. Complete positive association was found for QAP4.1-DQA1*05, QAP4.2-DQA1*0601, QAP1.2-DR2 group, QAP3.2-DRB1*09, QAP4.1-DRB1*03. A total of 28 different four point (DRB1-QAP-DQA1-DQB1) haplotypes were deduced and the most frequent haplotypes were DRB1*1602-QAP1.2-DQA1*0102-DQB1*0502 (N = 18, H.f. = 15%) and DRB1*09-QAP3.2-DQA1*03-DQB1*03032 (N = 18, H.f. = 15%) followed by the haplotypes DRB1*1401-QAP1.3-DQA1*01-DQB1*0502, DRB1*1202-QAP4.2-DQA1*0601-DQB1*0301 and DRB1*1502-QAP1.2-DQA1*0101-DQB1*0501 with H.f. 9.1%, 6.7% and 5.0% respectively. The other 23 haplotypes were all less than 5% (H.f. 0.8%-5%). The relationship between the QAP alleles and DQA1 in the Dai minority is the same as that in the Chinese and the Caucasoid population.  相似文献   

16.
The association of narcolepsy with HLA-DQB1*0602 is established in Japanese, African-Americans, European, and North American Caucasians. We examined DRB1, DRB3, DRB4, DRB5, DQA1, and DQB1 in 163 patients with centrally mediated daytime sleepiness (100 with narcolepsy) and 211 Korean controls. In this population, the DQB1*0602 association was always evident in the context of the DRB1*1501-DQA1*0102-DQB1*0602 haplotype. The DQB1*0602 association was highest in cases with hypocretin deficiency (100% vs 13% in controls), most of which had narcolepsy-cataplexy (81%). A weaker DQB1*0602 (45%) association was present in cases without cataplexy. No human leukocyte antigen (HLA) association was present in idiopathic hypersomnia or in cases with normal cerebrospinal fluid (CSF) hypocretin-1. As in other populations, DQB1*0602 homozygosity increased risk in cases with cataplexy and/or hypocretin deficiency (odds ratio = 2.0 vs heterozygotes). Non-DQB1*0602 allelic effects were also observed but could not be interpreted in the context of DQB1*0602 overabundance and linkage disequilibrium. We therefore next analyzed compound heterozygote effects in 77 subjects with either hypocretin deficiency or cataplexy and one copy of DRB1*1501-DQA1*0102-DQB1*0602, a sample constructed to maximize etiologic homogeneity. In this analysis, we found additional predisposing effects of DQB1*0301 and protective effects for DQA1*0103-DQB1*0601. Unexpectedly, the predisposing effects of DQB1*0301 were present in the context of various DQA1-bearing haplotypes. A predisposing effect of DQA1*0303 was also suggested. These results indicate a remarkable consistency in the complex HLA association present in narcolepsy across multiple ethnic groups.  相似文献   

17.
系统性红斑狼疮临床表现与HLA Ⅱ类单倍型关联的研究   总被引:7,自引:1,他引:6  
目的 探讨系统性红斑狼疮(SLE)易感基因致病的模式。方法 利用多聚酶链反应/特异寡核控针杂交(PCR/SSOPH)方法检测113例确诊SLE病人的HLAⅡ基因型并进行单倍型分析。结果 SLF病人的单倍型具有特定的结构特征,即以2个或3个重型SLE相关基因共同组成1个单倍型;反之,2个或3个轻型SLE相关基因组成另1个单倍型;重型基因和轻型基因之间很少有强连锁不平衡。DQA1*0301-DQB1*  相似文献   

18.
We have investigated the distribution of HLA class II alleles and haplotypes in 107 Korean families (207 parents and 291 children) for the HLA-DRB1, DRB3/B4/B5, DQA1, DQB1 and DPB1 loci. Numbers of alleles observed for each locus were DRB1: 25, DQA1: 14, DQB1: 15, and DPB1: 13. Only two to three alleles were observed for the DRB3 (*0101, *0202, *0301), DRB4 (*0103, * 0103102 N), and DRB5 (*0101, *0102) loci. These alleles showed strong associations with DRB1 alleles: DRB3*0101 with DRB1*1201, *1301 and *1403; DRB3*0301 with DRB1*1202 and *1302; DRB3*0202 with DRB1*0301, *1101, *1401 and *1405; DRB5*0101 and *0102 were exclusively associated with DRB1*1501 and *1502, respectively. The seven most common DRB1-DQB1 haplotypes of frequencies > 0.06 accounted for 52% of the total haplotypes. These haplotypes were exclusively related with the seven most common DRB1-DRB3/B4/B5-DQA1-DQB1 haplotypes: DRB1*1501-DRB5*0101-DQA1*0102-DQB1*0602 (0.085), DRB1*0405-DRB4*0103-DQA1*0303-DQB1*0401 (0.082), DRB1*09012-DRB4*0103-DQA1*0302-DQB1*03032 (0.082), DRB1*0101-DQA1*0101-DQB1*0501 (0.075), DRB1*0701-DRB4*0103-DQA1*0201-DQB1*0202 (0.065), DRB1*0803-DQA1*0103-DQB1*0601 (0.065), and DRB1*1302-DRB3*0301-DQA1*0102-DQB1*0604 (0.065). When these haplotypes were extended to the DPB1 locus, much diversification of haplotypes was observed and only one haplotype remained with a frequency of > 0.06: DRB1*0405-DRB4*0103-DQA1*0303-DQB1*0401-DPB1*0501 (0.062). Such diversification would have resulted from cumulated events of recombination within the HLA class II region, and the actual recombination rate observed between the HLA-DQB1 and DPB1 loci was 2.3% (10/438 informative meioses, including 2 recombinants informative by analysis of TAP genes). Comparison of the distribution of DRB1-DQB1 haplotypes with other populations revealed that Koreans are closest to Japanese people. However, Koreans share a few haplotypes with white people and Africans, which are rare in Japanese: DRB1*0701-DQB1*0202 and DRB1*1302-DQB1*0609. The results obtained in this study will provide useful information for anthropology, organ transplantation and disease association studies.  相似文献   

19.
HLA—DR,DQ基因多态性与系统性红斑狼疮相关性的研究   总被引:12,自引:1,他引:12  
应用聚合酶链反应结合顺序特异的寡核苷酸探针杂交(PCR/SSOPH)方法对江苏籍汉族SLE患者和健康对照组HLA-DRB1、DQA1:DQB1基因作寡核苷酸分型。结果发现患者组中DRB1*1501、DQA1*0102等位基因频率及HLA-DRB1*1501、-DQA1*0102、-DQB1*0602单倍型频率均明显高于正常对照组;相反,DRB1*04(DR4)、DQA1*0601频率则明显低于正常对照组。所有DQB1等位基因频率在两组间无显著差异,而DQA1*0102仅存在于DR2阳性的个体之中,推测汉族SLE的易感基因可能靠近DR位点,且与单倍型HLA-DRB1*1501、-DQA1*0102、-DQB1*0602紧密连锁,该单倍型可作为汉族SLE易感的遗传标记。相反DR4,DQA1*0601则对SLE发病可能有一定的保护性。  相似文献   

20.
Celiac disease (CD) has been recently reported to be primarily associated with the DQ(alpha 1*0501, beta 1*0201) heterodimer encoded in cis on DR3 haplotype and in trans in DR5,7 heterozygous individuals. The high incidence of DR5,7 heterozygotes, reflecting the high frequency of the DR5 allele in Italy, makes the analysis of the Italian CD patients critical. Polymerase chain reaction-amplified DNA from 50 CD patients and 50 controls, serologically typed for DR and DQw antigens, was hybridized with five DQA1-specific oligonucleotide probes detecting DQA1*0101 + 0102 + 0103, DQA1*0201, DQA1*0301 + 0302, DQA1*0401 + 0501 + 0601, and DQA1*0501 and a DQB1-sequence-specific oligonucleotide probe recognizing DQB1*0201 allele. As expected by the DR-DQ disequilibria, DQA1*0201 [62% in patients versus 26% in controls, relative risk (RR) = 5] and DQA1*0501 (96% versus 56%, RR = 19) show positive association with the disease. Of CD patients, 92% (50% DR3 and 42% DR5,7) compared to 18% of the controls carry both DQA1*0501 and DQB1*0201 alleles, so that the combination confers an RR of 52, higher than both the risks of the single alleles (DQA1*0501 RR = 19, DQB1*0201 RR = 30), confirming the primary role of the dimer in determining genetic predisposition to CD both in DR3 and in DR5,7 subjects.  相似文献   

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