Optimized distortion correction technique for echo planar imaging.

A new phase-shifted EPI pulse sequence is described that encodes EPI phase errors due to all off-resonance factors, including B(o) field inhomogeneity, eddy current effects, and gradient waveform imperfections. Combined with the previously proposed multichannel modulation postprocessing algorithm (Chen and Wyrwicz, MRM 1999;41:1206-1213), the encoded phase error information can be used to effectively remove geometric distortions in subsequent EPI scans. The proposed EPI distortion correction technique has been shown to be effective in removing distortions due to gradient waveform imperfections and phase gradient-induced eddy current effects. In addition, this new method retains advantages of the earlier method, such as simultaneous correction of different off-resonance factors without use of a complicated phase unwrapping procedure. The effectiveness of this technique is illustrated with EPI studies on phantoms and animal subjects. Implementation to different versions of EPI sequences is also described. Magn Reson Med 45:525-528, 2001.     

Readout-segmented EPI for rapid high resolution diffusion imaging at 3 T

Readout mosaic segmentation has been suggested as an alternative approach to EPI for high resolution diffusion-weighted imaging (DWI). In the readout-segmented EPI (RS-EPI) scheme, segments of k-space are acquired along the readout direction. This reduces geometric distortions due to the decrease in readout time. In this work, further distortion reduction is achieved by combining RS-EPI with parallel imaging (PI). The performance of the PI-accelerated RS-EPI scheme is assessed in volunteers and patients at 3T with respect to both standard EPI and PI-accelerated EPI. Peripherally cardiac gated and non-gated RS-EPI images are acquired to assess whether motion due to brain pulsation significantly degrades the image quality. Due to the low off-resonance of PI-driven RS-EPI, we also investigate if the eddy currents induced by the diffusion gradients are low enough to use the Stejskal-Tanner diffusion preparation instead of the twice-refocused eddy-current compensated diffusion preparation to reduce TE. It is shown that non-gated phase corrected DWI performs equally as well as gated acquisitions. PI-driven DW RS-EPI images with substantially less distortion compared with single-shot EPI are shown in patients-allowing the delineation of structures in the lower parts of the brain. A twice-refocused diffusion preparation was found necessary to avoid blurring in the DWI data. This paper shows that the RS-EPI scheme may be an important alternative sampling strategy to EPI to achieve high resolution T2-weighted and diffusion-weighted images.     

Correction of off resonance-related distortion in echo-planar imaging using EPI-based field maps

We present, here, a simple method for measurement and correction of off-resonance related geometric distortion in echo-planar imaging (EP1). This method uses high signal-to-noise ratio (SNR) EPI-based field maps, rapidly acquired using a series of gradient recalled images collected across a range of TE values. This field map is distorted in the same manner as the EPI images to be unwarped, providing a direct look-up table for the correct location of each pixel of data. This method adds very little scan time and is robust and easy to implement.     

Clinical multishot DW-EPI through parallel imaging with considerations of susceptibility, motion, and noise.

Geometric distortions and poor image resolution are well known shortcomings of single-shot echo-planar imaging (ss-EPI). Yet, due to the motion immunity of ss-EPI, it remains the most common sequence for diffusion-weighted imaging (DWI). Moreover, both navigated DW interleaved EPI (iEPI) and parallel imaging (PI) methods, such as sensitivity encoding (SENSE) and generalized autocalibrating parallel acquisitions (GRAPPA), can improve the image quality in EPI. In this work, DW-EPI accelerated by PI is proposed as a self-calibrated and unnavigated form of interleaved acquisition. The PI calibration is performed on the b = 0 s/mm2 data and applied to each shot in the rest of the DW data set, followed by magnitude averaging. Central in this study is the comparison of GRAPPA and SENSE in the presence of off-resonances and motion. The results show that GRAPPA is more robust than SENSE against both off-resonance and motion-related artifacts. The SNR efficiency was also investigated, and it is shown that the SNR/scan time ratio is equally high for one- to three-shot high-resolution diffusion scans due to the shortened EPI readout train length. The image quality improvements without SNR efficiency loss, together with motion tolerance, make the GRAPPA-driven DW-EPI sequence clinically attractive.     

Reducing flow artifacts in echo-planar imaging

Echo-planar imaging (EPI) is very susceptible to flow artifacts. Two ways to improve its flow properties are presented. First, “partial flyback” is proposed to reduce artifacts arising from flow in the readout direction. Near the center of k-space, only the even echoes of the EPI echo-train are used. Partial flyback is shown to improve the readout-flow properties at the expense of a slight worsening of the phase-encode flow and off-resonance properties. We recommend that the flyback region acquire 95% of the energy in k-space. Second, “inside-out” EPI is used to reduce artifacts arising from flow in the phase-encode direction. Data collection begins at the center of k-space, with separate interleaves to acquire the top and bottom halves of k-space. Partial flyback is combined with partial-Fourier EPI and inside-out EPI. Partial-flyback inside-out EPI has worse off-resonance properties than partial-flyback partial-Fourier EPI but demonstrates better flow properties and does not require partial k-space reconstruction.     

Correction for EPI distortions using multi-echo gradient-echo imaging.

A novel and effective technique is described for distortion correction in echo planar imaging (EPI) utilizing the field maps derived from multi-echo gradient-echo images. The distortions from different off-resonance related factors such as field inhomogeneity, eddy current effect, radiofrequency pulse frequency offset, and chemical shift effect can be simultaneously reduced to a great extent. With the proposed post-processing algorithm of multi-channel modulation, distortions may be corrected without unwrapping the phase discontinuities in the derived field map, a process that usually restricts the application of other field map-based correction methods. Results from phantom and animal experiments at 4.7 T demonstrate the efficiency of the method in reducing the geometrical distortions in gradient-echo EPI.     

Analysis of T2 limitations and off-resonance effects on spatial resolution and artifacts in echo-planar imaging

Several aspects of blipped echo-planar imaging (EPI) are treated mathematically. An expression relating the necessary readout gradient strength and sampling time to the spatial resolution and readout duration is derived. It is shown how the net spatial resolution may be limited by the object's T2 characteristics and B0 field homogeneity, irrespective of the number of sampled points. Additionally, off-resonance effects result in a loss of spatial resolution and image distortion to a considerably greater degree than in conventional two-dimensional Fourier transform imaging. The extent of these effects is directly related to the time required to acquire the data matrix, and is therefore amplified when EPI is implemented on a standard commercial whole-body system which because of limited gradient performance uses necessarily longer sampling durations. Specific hardware modifications to a standard commercial imager are considered to allow successful EPI implementation. EPI image characteristics are compared quantitatively with those of conventional methods.     

Diffusion tensor imaging using single-shot SENSE-EPI.

SENSitivity Encoding (SENSE) greatly enhances the quality of diffusion-weighted echo-planar imaging (EPI) by reducing blurring and off-resonance artifacts. Such improvement would also be desirable for diffusion tensor imaging (DTI), but measures derived from the diffusion tensor can be extremely sensitive to any kind of image distortion. Whether DTI is feasible in combination with SENSE has not yet been explored, and is the focus of this study. Using a SENSE-reduction factor of 2, DTI scans in eight healthy volunteers were carried out with regular- and high-resolution acquisition matrices. To further improve the stability of the SENSE reconstruction, a new coil-sensitivity estimation technique based on variational calculus and the principles of matrix regularization was applied. With SENSE, maps of the trace of the diffusion tensor and of fractional anisotropy (FA) had improved spatial resolution and less geometric distortion. Overall, the geometric distortions were substantially removed and a significant resolution enhancement was achieved with almost the same scan time as regular EPI. DTI was even possible without the use of quadrature body coil (QBC) reference scans. Geometry-factor-related noise enhancement was only discernible in maps generated with higher-resolution matrices. Error boundaries for residual fluctuations in SENSE reconstructions are discussed. Our results suggest that SENSE can be combined with DTI and may present an important adjunct for future neuroimaging applications of this technique.     

PROPELLER EPI: an MRI technique suitable for diffusion tensor imaging at high field strength with reduced geometric distortions.

A technique suitable for diffusion tensor imaging (DTI) at high field strengths is presented in this work. The method is based on a periodically rotated overlapping parallel lines with enhanced reconstruction (PROPELLER) k-space trajectory using EPI as the signal readout module, and hence is dubbed PROPELLER EPI. The implementation of PROPELLER EPI included a series of correction schemes to reduce possible errors associated with the intrinsically higher sensitivity of EPI to off-resonance effects. Experimental results on a 3.0 Tesla MR system showed that the PROPELLER EPI images exhibit substantially reduced geometric distortions compared with single-shot EPI, at a much lower RF specific absorption rate (SAR) than the original version of the PROPELLER fast spin-echo (FSE) technique. For DTI, the self-navigated phase-correction capability of the PROPELLER EPI sequence was shown to be effective for in vivo imaging. A higher signal-to-noise ratio (SNR) compared to single-shot EPI at an identical total scan time was achieved, which is advantageous for routine DTI applications in clinical practice.     

Correction of physiologically induced global off-resonance effects in dynamic echo-planar and spiral functional imaging.

In functional magnetic resonance imaging, a rapid method such as echo-planar (EPI) or spiral is used to collect a dynamic series of images. These techniques are sensitive to changes in resonance frequency which can arise from respiration and are more significant at high magnetic fields. To decrease the noise from respiration-induced phase and frequency fluctuations, a simple correction of the "dynamic off-resonance in k-space" (DORK) was developed. The correction uses phase information from the center of k-space and a navigator echo and is illustrated with dynamic scans of single-shot and segmented EPI and, for the first time, spiral imaging of the human brain at 7 T. Image noise in the respiratory spectrum was measured with an edge operator. The DORK correction significantly reduced respiration-induced noise (image shift for EPI, blurring for spiral, ghosting for segmented acquisition). While spiral imaging was found to exhibit less noise than EPI before correction, the residual noise after the DORK correction was comparable. The correction is simple to apply and can correct for other sources of frequency drift and fluctuations in dynamic imaging.     

New approach for correcting distortions in echo planar imaging.

A new method is described that can correct the distortions due to multiple off-resonance effects in echo planar imaging, including those caused by B(0) field inhomogeneities, eddy currents, and gradient waveform imperfections. The proposed method uses a phase encoded acquisition and is as effective as the method of Chen and Wyricz (Chen and Wyricz, Magn Reson Med 1999;41:1206-1213) in correcting for distortions. Unlike Chen and Wyricz's approach, this new method works directly in distorted space and requires fewer scans. It also avoids the difficulties of phase unwrapping inherent in field mapping methods. Results using this new method with phantoms and human head scans at 3.0 T demonstrate the efficacy of the method in correcting distortions in both spin echo echo planar imaging (EPI) and gradient echo EPI.     

Interleaved echo planar imaging on a standard MRI system

This work describes an interleaved echo planar imaging (EPI) method for use on a standard whole body scanner. The data acquisition is divided into two to eight repetitions rather than one to two, as implemented by dedicated EPI systems. Interleaving allows the use of a lower sampling bandwidth with a significant increase in signal-to-noise. The method also has the advantages of relative ease of implementation, no need for postprocessing to remove image distortion, and no need for shimming on a case-by-case basis. The interleaved EPI method was applied to two applications ideally suited to EPI: breathhold T₂-weighted abdominal imaging and functional imaging. In vivo liver-lesion contrast as measured in a 35-patient study showed increased contrast for the Interleaved EPI by an average factor of 1.21 (± 0.34) over conventional spin-echo imaging. CNR measurements showed the EPI to be comparable with conventional spin echo with a relative factor of 1.00 (± 0.36). Functional imaging with an eight-shot interleaved EPI sequence provided 128 × 128 images of cerebral activation during bilateral finger tapping.     

Centric ordering is superior to gradient moment nulling for motion artifact reduction in EPI

Echo-planar imaging (EPI) is sensitive to motion despite its rapid data acquisition rate. Compared with traditional imaging techniques, it is more sensitive to motion or flow in the phase-encode direction, which can cause image artifacts such as ghosting, misregistration, and loss of spatial resolution. Consequently, EPI of dynamic structures (eg, the cardiovascular system) could benefit from methods that eliminate these artifacts. In this paper, two methods of artifact reduction for motion in the phase-encode direction are evaluated. First, the k-space trajectory is evaluated by comparing centric with top-down ordered sequences. Next, velocity gradient moment nulling (GMN) of the phase-encode direction is evaluated for each trajectory. Computer simulations and experiments in flow phantoms and rabbits in vivo show that uncompensated centric ordering produces the highest image quality. This is probably due to a shorter readout duration, which reduces T2* relaxation losses and off-resonance effects, and to the linear geometry of phantoms and vessels, which can obscure centric blurring artifacts.     

Image distortion correction in EPI: comparison of field mapping with point spread function mapping.

Echo-planar imaging (EPI) can provide rapid imaging by acquiring a complete k-space data set in a single acquisition. However, this approach suffers from distortion effects in geometry and intensity, resulting in poor image quality. The distortions, caused primarily by field inhomogeneities, lead to intensity loss and voxel shifts, the latter of which are particularly severe in the phase-encode direction. Two promising approaches to correct the distortion in EPI are field mapping and point spread function (PSF) mapping. The field mapping method measures the field distortions and translates these into voxel shifts, which can be used to assign image intensities to the correct voxel locations. The PSF approach uses acquisitions with additional phase-encoding gradients applied in the x, y, and/or z directions to map the 1D, 2D, or 3D PSF of each voxel. These PSFs encode the spatial information about the distortion and the overall distribution of intensities from a single voxel. The measured image is the convolution of the undistorted density and the PSF. Measuring the PSF allows the distortion in geometry and intensity to be corrected. This work compares the efficacy of these methods with equal time allowed for field mapping and PSF mapping.     

DTI常用扫描序列原理及比较

磁共振弥散张量成像技术是利用水分子的弥散各向异性进行成像,可用于脑白质纤维研究,常用扫描技术包括单次激发平面回波成像(EPI),线阵扫描弥散成像,导航自旋回波弥散加权成像(LSDI),半傅立叶探测单发射快速自旋回波成像等。每种成像技术各有其优缺点,EPI扫描时间短,图像信噪比高,但存在化学位移伪影、磁敏感性伪影、几何变形;LSDI精确度高,几乎无伪影及变形,但扫描时间过长;导航自旋回波弥散加权成像运动伪影少,但扫描时间长;半傅立叶探测单发射快速自旋回波成像扫描时间短,但图像模糊。综合比较,单次激发平面回波成像是用于临床研究较适宜的方法。     

Correction of spatial distortion in EPI due to inhomogeneous static magnetic fields using the reversed gradient method

PURPOSE: To derive and implement a method for correcting spatial distortion caused by in vivo inhomogeneous static magnetic fields in echo-planar imaging (EPI). MATERIALS AND METHODS: The reversed gradient method, which was initially devised to correct distortion in images generated by spin-warp MRI, was adapted to correct distortion in EP images. This method provides point-by-point correction of distortion throughout the image. EP images, acquired with a 3 T MRI system, of a phantom and a volunteer's head were used to test the correction method. RESULTS: Good correction was observed in all cases. Spatial distortion in the uncorrected images ranged up to 4 pixels (12 mm) and was corrected successfully. CONCLUSION: The correction was improved by the application of a nonlinear interpolation scheme. The correction requires that two EP images be acquired at each slice position. This increases the acquisition time, but an improved signal-to-noise ratio (SNR) is seen in the corrected image. The local SNR gain decreases with increasing distortion. In many EPI acquisition schemes, multiple images are averaged at each slice position to increase the SNR; in such cases the reversed gradient correction method can be applied with no increase in acquisition duration.     

ADC mapping by means of a single-shot spiral MRI technique with application in acute cerebral ischemia.

Diffusion-weighted MRI based on single-shot echo planar imaging (EPI) has been established as a useful tool to study acute cerebral ischemia. However, EPI is prone to spatial distortion and ghosting artifacts. In this study, a pulse sequence for diffusion-weighted imaging (DWI) based on a single-shot spiral readout is presented. Using this technique, multislice apparent diffusion coefficient (ADC) mapping can be performed in an interleaved fashion with the same temporal resolution as EPI. Other advantages associated with ADC mapping by the single-shot spiral method include minimal ghosting artifacts, reduced spatial distortion, and capability to scan in arbitrary planes. This technique has been successfully tested in five normal volunteers and three stroke patients. It has been demonstrated that the single-shot spiral technique is capable of producing high quality DWI and ADC trace maps (128 x 128) in the axial, sagittal, and coronal planes, which facilitate clinical diagnosis.     

Reducing off-resonance distortion by echo-time interpolation.

Off-resonant spins, produced by chemical shift, tissue-susceptibility differences, or main-field inhomogeneity, can cause blurring or shifts, severely compromising the diagnostic value of magnetic resonance images. To mitigate these off-resonance effects, the authors propose a technique whereby two images are acquired at different echo times (TEs) and interpolated to produce a single image with dramatically-reduced blurring. The phase difference of these two images is not used to produce a field map; instead, the weighted complex-valued average of the two images is used to produce a single image. Previously-described methods reconstruct a set of preliminary images, each at a different off-resonant frequency, and then assemble these into one final image, choosing the best off-resonant frequency for each voxel. Compared to these methods, the proposed technique requires the same or less processing time and is much less sensitive to errors in the field map. This technique was applied to centric-ordered EPI but it can be applied to any imaging trajectory, including one-shot EPI, spiral imaging, projection-reconstruction imaging, and 2D GRASE. Magn Reson Med 45:269-276, 2001.     

Gaussian process modeling for image distortion correction in echo planar imaging.

An enhanced method for correction of image distortion due to B(0)-field inhomogeneities in echo planar imaging (EPI) is presented. The algorithm is based on the measurement of the point spread function (PSF) associated with each image voxel using a reference scan. The expected distortion map in the phase encode direction is then estimated using a nonparametric inference algorithm known as Gaussian process modeling. The algorithm is shown to be robust to the presence of regions of low signal-to-noise in the image and large inhomogeneities.     

Real-time autoshimming for echo planar timecourse imaging.

Head motion within an applied magnetic field alters the effective shim within the brain, causing geometric distortions in echo planar imaging (EPI). Even if subtle, change in shim can lead to artifactual signal changes in timecourse EPI acquisitions, which are typically performed for functional MRI (fMRI) or diffusion tensor imaging. Magnetic field maps acquired before and after head motions of clinically realistic magnitude indicate that motion-induced changes in magnetic field may cause translations exceeding 3 mm in the phase-encoding direction of the EPI images. The field maps also demonstrate a trend toward linear variations in shim changes as a function of position within the head, suggesting that a real-time, first-order correction may compensate for motion-induced changes in magnetic field. This article presents a navigator pulse sequence and processing method, termed a "shim NAV," for real-time detection of linear shim changes, and a shim-compensated EPI pulse sequence for dynamic correction of linear shim changes. In vivo and phantom experiments demonstrate the detection accuracy of shim NAVs in the presence of applied gradient shims. Phantom experiments demonstrate reduction of geometric distortion and image artifact using shim-compensated EPI in the presence of applied gradient shims. In vivo experiments with intentional interimage subject motion demonstrate improved alignment of timecourse EPI images when using the shim NAV-detected values to update the shim-compensated EPI acquisition in real time.